Template-based Modeling Results for SYME_ECOLI

Submitted Primary Sequence

>Length 113
MTDTHSIAQPFEAEVSPANNRHVTVGYASRYPDYSRIPAITLKGQWLEAAGFATGTAVDVKVMEGCIVLTAQPPAAEESELMQSLRQVCKLSARKQKQVQAFIGVIAGKQKVA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTDTHSIAQPFEAEVSPANNRHVTVGYASRYPDYSRIPAITLKGQWLEAAGFATGTAVDVKVMEGCIVLTAQPPAAEESELMQSLRQVCKLSARKQKQVQAFIGVIAGKQKVA
CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEECCHHHHHHCCCCCCEEEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTDTHSIAQPFEAEVSPANNRHVTVGYASRYPDYSRIPAITLKGQWLEAAGFATGTAVDVKVMEGCIVLTAQPPAAEESELMQSLRQVCKLSARKQKQVQAFIGVIAGKQKVA
54333121321314223232100100102323322301100010200230112221202020131000000223223223002202300311132132012002102244434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTDTHSIAQPFEAEVSPANNRHVTVGYASRYPDYSRIPAITLKGQWLEAAGFATGTAVDVKVMEGCIVLTAQPPAAEESELMQSLRQVCKLSARKQKQVQAFIGVIAGKQKVA
1	PPA-I	1mvfD	0.136	0.389	1.078	threading_1	----------------------------SSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPV-----------------------------------------
2	HHPRED-l	1mvf_D	0.136	0.389	1.074	threading_2	----------------------S---SVKRWGN---SPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPV-----------------------------------------
3	HHPRED-l	3o27_A	0.179	0.496	1.062	threading_3	-----------------G-IRKLVVPRAY-----HTTFYLLIPKDIAEALDIKPDDTFILNMEDGDIVLSYKRVK--ELKI--------------------------------
4	MUSTER	3tdgA1	0.084	0.841	0.681	threading_4	-------QDNLVSVIEKQTNKKVRILEIKPLKSSQDLKMVVIEDP-------DTKYNIPLVVSDGNLIIGLSSNKSDDVQLVAETNQKVQALNATQQNSAKLNAIF---NEI-
5	SPARKS	1fx7a3	0.143	0.743	0.736	threading_5	--GADDANLVRLTELPAGSPVAVVVRQLTEHVQGD--IDLI---TRLKDAGVVPNARVTVETTPGGVTIVIPGHENTLPHEMAHAVKVEKV----------------------
6	PROSPECT2	2yz0A	0.074	0.832	0.671	threading_6	MSLSHLDLTKRKSSWDKQPQIIFEITLRSVDKEPVES-------------------SITLHFAAPEIEFKNVQMDSQLQMLKSEFKKIHNTSTSFTQEKLDEFQNVVNTQSLE
7	PPA-I	1ub4C	0.100	0.531	0.911	threading_7	----------------------------------IHSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFT-------------------LAELVNDITPENLHE
8	HHPRED-l	2l66_A	0.245	0.469	0.916	threading_8	-----------------AVEEIVKV---------SRNYQVTIPAKVRQKFQIKEGDLVKVTFDESEGVVKIQLLK--EP--WK------------------------------
9	HHPRED-g	1mvf_D	0.136	0.389	0.993	threading_9	-------------------------SSVKRWGN---SPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPV-----------------------------------------
10	SP3	1fxka	0.163	0.867	0.506	threading_10	-----QNVQHQLAQFQQLQQQAQAISV-----QKQTVEQINETQKALEELSRAADD-AEVYKSSGNILIRVAKDEEELQEKLETLQLREKTIERQEERVKKLVNIQEAK----

Predicted Tertiary Structure


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TM-score=0.516 to 1mvfD SCOP code=b.129.1.1	TM-score=0.471 to 1mvfD SCOP code=b.129.1.1	TM-score=0.404 to 1mvfD SCOP code=b.129.1.1	TM-score=0.514 to 1kd9A SCOP code=h.1.3.1	TM-score=0.702 to 1qbeB SCOP code=d.85.1.1