Template-based Modeling Results for STPA_ECOLI

Submitted Primary Sequence

>Length 134
MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEEEQQQRELAERQEKISTWLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDVNGETKTWTGQGRTPKPIAQALAEGKSLDDFLI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEEEQQQRELAERQEKISTWLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDVNGETKTWTGQGRTPKPIAQALAEGKSLDDFLI
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEEEQQQRELAERQEKISTWLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDVNGETKTWTGQGRTPKPIAQALAEGKSLDDFLI
34301201210110210044021310230032032003223433332333213133202200300431202032001211222342234233220202022231323111121310300130133122132123
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEEEQQQRELAERQEKISTWLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDVNGETKTWTGQGRTPKPIAQALAEGKSLDDFLI
1	MUSTER	1lr1A	0.579	0.425	1.088	threading_1	-SEALKILNNIRTLRAQARESTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKL----------------------------------------------------------------------------
2	SAM-T99	1hnsA	0.727	0.328	2.311	threading_2	------------------------------------------------------------------------------------------AQRPAKYSYVDENGETKTWTGQGRTPAVIKKAMDEGKSLDDFLI
3	SPARKS	1lr1a	0.579	0.425	1.073	threading_3	-SEALKILNNIRTLRAQARESTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKL----------------------------------------------------------------------------
4	PPA-I	1hnrA	0.727	0.328	1.368	threading_4	------------------------------------------------------------------------------------------AQRPAKYSYVDENGETKTWTGQGRTPAVIKKAMDEGKSLDDFLI
5	PPA-I	1lr1A	0.579	0.425	1.618	threading_5	-SEALKILNNIRTLRAQARESTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKL----------------------------------------------------------------------------
6	HHPRED-l	2l93_A	0.651	0.321	3.927	threading_6	------------------------------------------------------------------------------------------AARPAKYSYVDENGETKTWTGQGRTPAVIKKAMEQGKQLEDFL-
7	HHPRED-l	3nr7_A	0.543	0.604	4.483	threading_7	-SEALKILNNIRTLRAQARESTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQYREMLIADGIDPNELLNSMAAA----------------------------------------------------
8	HHPRED-g	2l93_A	0.659	0.328	3.302	threading_8	------------------------------------------------------------------------------------------AARPAKYSYVDENGETKTWTGQGRTPAVIKKAMEQGKQLEDFLI
9	HHPRED-g	3nr7_A	0.543	0.604	3.993	threading_9	-SEALKILNNIRTLRAQARESTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQYREMLIADGIDPNELLNSMAAA----------------------------------------------------
10	SAM-T99	1hnrA	0.727	0.328	2.311	threading_10	------------------------------------------------------------------------------------------AQRPAKYSYVDENGETKTWTGQGRTPAVIKKAMDEGKSLDDFLI

Predicted Tertiary Structure


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TM-score=0.506 to 1lr1A SCOP code=a.155.1.1	TM-score=0.594 to 1hnsA SCOP code=a.155.1.1	TM-score=0.523 to 1lr1A SCOP code=a.155.1.1	TM-score=0.595 to 1hnrA SCOP code=a.155.1.1	TM-score=0.506 to 1lr1A SCOP code=a.155.1.1