Template-based Modeling Results for SHOB_ECOLI


  Submitted Primary Sequence

>Length 26
MTDCRYLIKRVIKIIIAVLQLILLFL
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--------10--------20
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTDCRYLIKRVIKIIIAVLQLILLFL
CCCHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTDCRYLIKRVIKIIIAVLQLILLFL
55203100220020000001001112
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--------10--------20
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMTDCRYLIKRVIKIIIAVLQLILLFL
1SPARKS1jb0m0.3081.0002.003threading_1LTDTQVYVALVIALLPAVLAFRLSTE
2PPA-I1spfA0.1541.0001.388threading_2IPCCPVNLKRLLVVVVVVVLVVVVIV
3SP31jb0m0.3081.0001.495threading_3LTDTQVYVALVIALLPAVLAFRLSTE
4SPARKS2ww9c0.1900.8081.622threading_4RVDSLVVLFLSVGFIFSVIAL-----
5PPA-I1iijA0.1600.9621.226threading_5-EQRASPVTFIIATVVGVLLFLILVV
6SP31qovh20.2500.9231.179threading_6--DLASLAIYSFWIFLAGLIYYLQTE
7SPARKS1rh5c0.1541.0001.344threading_7FSKIRVKPEHVIGVTVAFVIIEAILT
8PPA-I2axtm0.1921.0001.151threading_8EVNQLGLIATALFVLVPSVFLIILYV
9SP32ww9c0.1900.8081.166threading_9RVDSLVVLFLSVGFIFSVIAL-----
10SPARKS1qovh20.2500.9231.329threading_10--DLASLAIYSFWIFLAGLIYYLQTE

  Predicted Tertiary Structure

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TM-score=0.636 to 1r7gA
SCOP code=j.35.1.1
TM-score=0.592 to 2r2vA
SCOP code=h.1.3.1
TM-score=0.636 to 1r7gA
SCOP code=j.35.1.1
TM-score=0.522 to 1iijA
SCOP code=j.35.1.1
TM-score=0.639 to 1kd9A
SCOP code=h.1.3.1