Template-based Modeling Results for SAFA_ECOLI

Submitted Primary Sequence

>Length 65
MHATTVKNKITQRDNYKEIMSAIVVVLLLTLTLIAIFSAIDQLSISEMGRIARDLTHFIINSLQG
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--------10--------20--------30--------40--------50--------60

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MHATTVKNKITQRDNYKEIMSAIVVVLLLTLTLIAIFSAIDQLSISEMGRIARDLTHFIINSLQG
CCCCHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MHATTVKNKITQRDNYKEIMSAIVVVLLLTLTLIAIFSAIDQLSISEMGRIARDLTHFIINSLQG
55333232211233223201100000011111111011101312022012002101200122135
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--------10--------20--------30--------40--------50--------60

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MHATTVKNKITQRDNYKEIMSAIVVVLLLTLTLIAIFSAIDQLSISEMGRIARDLTHFIINSLQG
1	HHPRED-l	3arc_T	0.267	0.462	1.009	threading_1	-------------------METITYVFIFACIIALFFFAIFFREPP---RIT-------------
2	MUSTER	3etuA	0.177	0.954	0.654	threading_2	SYENE-KNILV-KSCVSTVLTSFEAVCDFMLDGLA-FRDRKTLSYELGPLFNTEFTKFVKNNASI
3	SPARKS	3k6ta	0.185	0.831	0.722	threading_3	----------SHEATVEYLADLVKEKKHLTL-FPHMFSNVERLLDDEIGRVRVALFQTEFPRVEL
4	PROSPECT2	2x9wA4	0.066	0.938	0.602	threading_4	RK----ADKVSQEEKQLVVTTKDALDRAVAAYNALTAQQQTQQEKEKVDKAQAAYNAAVIAANNA
5	PPA-I	2zjsE	0.152	0.708	0.821	threading_5	ARAELARVTWPTREQVVEGTQAILLFTLAFMVILGLYDTVFRFLIG-------------------
6	HHPRED-l	1zav_U	0.276	0.446	0.844	threading_6	------------------------------MTIDEIIEAIEKLTVSELAELVKKLEDKF------
7	HHPRED-g	1zav_U	0.300	0.462	0.666	threading_7	------------------------------MTIDEIIEAIEKLTVSELAELVKKLEDKF-----G
8	SP3	1t3ja	0.161	0.954	0.610	threading_8	--ATTFARLCQQVDMTQKHLEEEIARLSKEIDQLEKMQNNSKLLRNKAVQLESELENFSKQFLH-
9	SAM-T99	2zkqc1	0.231	1.000	0.660	threading_9	GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGF
10	MUSTER	3p8cB	0.159	0.969	0.653	threading_10	AYTSVSKASLGLADHLGKMMNTIIFHTKMVDSLVEMLVETSDLSI--FCFYSRAFEKMFQQCLEL

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.413 to 1i6vD SCOP code=e.29.1.2	TM-score=0.533 to 1et1A SCOP code=j.15.1.1	TM-score=0.448 to 2c0sA SCOP code=a.30.7.1	TM-score=0.609 to 2c2lA SCOP code=a.118.8.1	TM-score=0.553 to 1ufiC SCOP code=a.30.4.1