Template-based Modeling Results for RRAB_ECOLI

Submitted Primary Sequence

>Length 138
MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNGEDGDDEDFVDEDDDGVRH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNGEDGDDEDFVDEDDDGVRH
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHEECCHHHHHHHHHHHHHCCCEECCHHHCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCEECCCEEEECCCCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNGEDGDDEDFVDEDDDGVRH
552332133123102200220142223131101010000023131012001201411120221321323422200000000102022310211023002002303110110000021331332333312333342245
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNGEDGDDEDFVDEDDDGVRH
1	MUSTER	1nxiA	0.592	0.906	3.224	threading_1	LSVEELIEIQKEETRDIIQALLEDGSDPDALYEIEHHLFAEDFDKLEKAAVEAFKMGFEVLEAEETEDEDGNKLLCFDATMQSALDAKLIDEQVEKLVNLAEKFDIIYDGWGTYYE-------------GLEHHHHHH
2	SPARKS	1nxia	0.584	0.906	4.078	threading_2	LSVEELIEIQKEETRDIIQALLEDGSDPDALYEIEHHLFAEDFDKLEKAAVEAFKMGFEVLEAEETEDEDGNKLLCFDATMQSALDAKLIDEQVEKLVNLAEKFDIIYDGWGTYYEGLEHHHHHH-------------
3	PROSPECT2	1nxiA	0.592	0.906	2.430	threading_3	LSVEELIEIQKEETRDIIQALLEDGSDPDALYEIEHHLFAEDFDKLEKAAVEAFKMGFEVLEAEETEDEDGNKLLCFDATMQSALDAKLIDEQVEKLVNLAEKFDIIYDGWGTYYEGL-------------EHHHHHH
4	PPA-I	1nxiA	0.584	0.906	6.442	threading_4	LSVEELIEIQKEETRDIIQALLEDGSDPDALYEIEHHLFAEDFDKLEKAAVEAFKMGFEVLEAEETEDEDGNKLLCFDATMQSALDAKLIDEQVEKLVNLAEKFDIIYDGWGTYYEGLEHHHHHH-------------
5	HHPRED-l	1nxi_A	0.589	0.899	8.893	threading_5	LSVEELIEIQKEETRDIIQALLEDGSDPDALYEIEHHLFAEDFDKLEKAAVEAFKMGFEVLEAEETEDEDGNKLLCFDATMQSALDAKLIDEQVEKLVNLAEKFDIIYDGWGTYYEGLEHHHH------H--------
6	HHPRED-g	1nxi_A	0.592	0.906	7.439	threading_6	LSVEELIEIQKEETRDIIQALLEDGSDPDALYEIEHHLFAEDFDKLEKAAVEAFKMGFEVLEAEETEDEDGNKLLCFDATMQSALDAKLIDEQVEKLVNLAEKFDIIYDGWGTYYEGLEHHHH-------------HH
7	SP3	1nxia	0.584	0.906	3.973	threading_7	LSVEELIEIQKEETRDIIQALLEDGSDPDALYEIEHHLFAEDFDKLEKAAVEAFKMGFEVLEAEETEDEDGNKLLCFDATMQSALDAKLIDEQVEKLVNLAEKFDIIYDGWGTYYEGLEHHHHHH-------------
8	SAM-T99	1nxiA	0.612	0.877	6.321	threading_8	----ELIEIQKEETRDIIQALLEDGSDPDALYEIEHHLFAEDFDKLEKAAVEAFKMGFEVLEAEETEDEDGNKLLCFDATMQSALDAKLIDEQVEKLVNLAEKFDIIYDGWGTYYE-------------GLEHHHHHH
9	MUSTER	2depA2	0.143	0.913	0.721	threading_9	-DYNTDDPVKRDILYELVKNLLEKGVPIDG-VGHQTHIDIYPVERIIESIKKFAGLGLDNIYSWNDRSDYGDSI--------PDYILTLQAKRYQELFDALKENKDIVSAWG--ISDKYSWLNGFPVKRTNDRNFMPK
10	SPARKS	2w8ja	0.144	0.754	0.731	threading_10	MTAHEKRERLWSNARALHGGLKAMGFRLGTETC-DSAVMLEDQEQAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSI--CAEHTPAQIQTVLGMFQAAGRAVGVI-------------------------------

Predicted Tertiary Structure


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TM-score=0.895 to 1nxiA SCOP code=d.58.47.1	TM-score=0.880 to 1nxiA SCOP code=d.58.47.1	TM-score=0.880 to 1nxiA SCOP code=d.58.47.1	TM-score=0.870 to 1nxiA SCOP code=d.58.47.1	TM-score=0.895 to 1nxiA SCOP code=d.58.47.1