Template-based Modeling Results for RS20_ECOLI

Submitted Primary Sequence

>Length 87
MANIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA
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--------10--------20--------30--------40--------50--------60--------70--------80

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MANIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MANIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA
553131022200122212312111210022002101200432332102400230121012003211012120221102012103425
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MANIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA
1	MUSTER	3i1oT	1.000	0.977	3.642	threading_1	--NIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA
2	SPARKS	1p6gt	1.000	0.954	3.699	threading_2	----KSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA
3	PROSPECT2	1p6gT	1.000	0.954	1.712	threading_3	----KSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA
4	PPA-I	3i1oT	1.000	0.977	5.584	threading_4	--NIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA
5	HHPRED-l	3r8n_T	1.000	0.966	5.718	threading_5	--NIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKL-
6	HHPRED-g	3r8n_T	1.000	0.977	5.214	threading_6	--NIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA
7	SP3	1p6gt	1.000	0.954	4.010	threading_7	----KSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA
8	SAM-T99	3i1oT	1.000	0.977	4.534	threading_8	--NIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA
9	MUSTER	2b64T	0.318	0.977	2.865	threading_9	--RNLSALKRHRQSLKRRLRNKAKKSAIKTLSKKAVQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKVRQLL
10	SPARKS	1fjgt	0.318	0.977	3.611	threading_10	--RNLSALKRHRQSLKRRLRNKAKKSAIKTLSKKAVQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKVRQLL

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.680 to 2b64T TM-score=0.913 to native SCOP code=a.7.6.1	TM-score=0.680 to 2b64T TM-score=0.913 to native SCOP code=a.7.6.1	TM-score=0.758 to 2b64T TM-score=0.642 to native SCOP code=a.7.6.1	TM-score=0.796 to 2b64T TM-score=0.664 to native SCOP code=a.7.6.1	TM-score=0.680 to 2b64T TM-score=0.913 to native SCOP code=a.7.6.1

Experimental Structure

Download 1vs5T

SCOP code=a.7.6.1