Template-based Modeling Results for RS17_ECOLI

Submitted Primary Sequence

>Length 84
MTDKIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAVL
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--------10--------20--------30--------40--------50--------60--------70--------80

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTDKIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAVL
CCCCEEEEEEEEEECCCCCEEEEEEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTDKIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAVL
554211101010022423200100011112132112002201202001332301210101022023113211000010113136
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTDKIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAVL
1	MUSTER	1vs7Q	1.000	0.964	4.489	threading_1	---KIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAVL
2	SPARKS	1fjgq	0.469	0.964	4.624	threading_2	---PKKVLTGVVVSDKMQKTVTVLVERQFPHPLYGKVIKRSKKYLAHDPEEKYKLGDVVEIIESRPISKRKRFRVLRLVESGRM
3	PROSPECT2	3bbnQ	0.375	0.952	1.686	threading_3	M----KTMQGRVVCATSDKTVAVEVVRLAPHPKYKRRVRMKKKYQAHDPDNQFKVGDVVRLEKSRPISKTKSFVALPVIARAAR
4	PPA-I	3bbnQ	0.362	0.952	8.195	threading_4	----MKTMQGRVVCATSDKTVAVEVVRLAPHPKYKRRVRMKKKYQAHDPDNQFKVGDVVRLEKSRPISKTKSFVALPVIARAAR
5	HHPRED-l	1qd7_I	0.537	0.952	4.376	threading_5	---QRKVYVGRVVSDKMDKTITVLVETYKKHPLYGKRVKYSKKYKAHDEHNEAKVGDIVKIMETRPLSATKRFRLVEIVEKAV-
6	HHPRED-g	1qd7_I	0.531	0.964	4.122	threading_6	---QRKVYVGRVVSDKMDKTITVLVETYKKHPLYGKRVKYSKKYKAHDEHNEAKVGDIVKIMETRPLSATKRFRLVEIVEKAVR
7	SP3	1fjgq	0.469	0.964	4.357	threading_7	---PKKVLTGVVVSDKMQKTVTVLVERQFPHPLYGKVIKRSKKYLAHDPEEKYKLGDVVEIIESRPISKRKRFRVLRLVESGRM
8	SAM-T99	1vs7Q	1.000	0.952	5.072	threading_8	----IRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAVL
9	MUSTER	3bbnQ	0.375	0.952	4.298	threading_9	M----KTMQGRVVCATSDKTVAVEVVRLAPHPKYKRRVRMKKKYQAHDPDNQFKVGDVVRLEKSRPISKTKSFVALPVIARAAR
10	SPARKS	1p6gq	1.000	0.940	4.430	threading_10	-----RTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAVL

Predicted Tertiary Structure


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TM-score=0.943 to 1vs7Q TM-score=0.959 to native SCOP code=b.40.4.5	TM-score=0.943 to 1vs7Q TM-score=0.959 to native SCOP code=b.40.4.5	TM-score=0.875 to 3bbnQ TM-score=0.851 to native SCOP code=i.1.1.1	TM-score=0.943 to 3bbnQ TM-score=0.878 to native SCOP code=i.1.1.1	TM-score=0.943 to 3bbnQ TM-score=0.880 to native SCOP code=i.1.1.1

Experimental Structure

Download 1vs7Q

SCOP code=b.40.4.5