Template-based Modeling Results for RS12_ECOLI


  Submitted Primary Sequence

>Length 124
MATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGVKDRKQARSKYGVKRPKA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGVKDRKQARSKYGVKRPKA
CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGVKDRKQARSKYGVKRPKA
4320211133232432233312213202332000020122234323122220020102211100000022122123101000111214301001010010000022143243231322244345
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGVKDRKQARSKYGVKRPKA
1MUSTER2avyL1.0000.9924.889threading_1-ATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGVKDRKQARSKYGVKRPKA
2SPARKS1fjgl0.7240.9925.758threading_2-PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKE
3PROSPECT21fjgl0.7320.9922.505threading_3-PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKA
4PPA-I2avyL1.0000.9926.323threading_4-ATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGVKDRKQARSKYGVKRPKA
5HHPRED-l2vqe_L0.7300.9849.199threading_5-PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPK-
6HHPRED-g2vqe_L0.7240.9928.319threading_6-PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKE
7SP31fjgl0.7240.9925.621threading_7-PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKE
8SAM-T992avyL1.0000.9927.862threading_8-ATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGVKDRKQARSKYGVKRPKA
9MUSTER1i97L0.7240.9924.111threading_9-PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKE
10SPARKS1s1hl0.2800.8633.933threading_10--------NYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLKNGKKVTAFVPNDGNFVDENDEVLLAGGKAKDIPGVRFKVVKVSLLALWKEKKEKPRS---------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.885 to 2avyL
TM-score=0.885 to native
SCOP code=b.40.4.5
TM-score=0.885 to 2avyL
TM-score=0.885 to native
SCOP code=b.40.4.5
TM-score=0.837 to 2avyL
TM-score=0.842 to native
SCOP code=b.40.4.5
TM-score=0.834 to 2avyL
TM-score=0.839 to native
SCOP code=b.40.4.5
TM-score=0.885 to 2avyL
TM-score=0.885 to native
SCOP code=b.40.4.5

  Experimental Structure

Download 1vs5L
SCOP code=b.40.4.5