Template-based Modeling Results for RS9_ECOLI

Submitted Primary Sequence

>Length 130
MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRKARRRPQFSKR
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRKARRRPQFSKR
CCCCEEEEEEECCCEEEEEEEEECCCEEEECCEEHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRKARRRPQFSKR
5532111010233201010002313020101321022111231011102100211312330001010212011000000000002000311321121025111023112322333122431344232243
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRKARRRPQFSKR
1	MUSTER	2avyI	1.000	0.977	4.608	threading_1	---NQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRKARRRPQFSKR
2	SPARKS	1fjgi	0.535	0.977	5.087	threading_2	---EQYYGTGRRKEAVARVFLRPGNGKVTVNGQDFNEYFQGLVRAVAALEPLRAVDALGRFDAYITVRGGGKSGQIDAIKLGIARALVQYNPDYRAKLKPLGFLTRDARVVERKKYGKHKARRAPQYSKR
3	PROSPECT2	3bbnI	0.452	0.969	3.017	threading_3	T----VIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQNPLWLQYVKTPLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEGLLTRDSRIVERKKPGLKKARKAPQFSKR
4	PPA-I	3e1cW	1.000	0.977	5.582	threading_4	---NQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRKARRRPQFSKR
5	HHPRED-l	2vqe_I	0.524	0.969	5.178	threading_5	-EQ--YYGTGRRKEAVARVFLRPGNGKVTVNGQDFNEYFQGLVRAVAALEPLRAVDALGRFDAYITVRGGGKSGQIDAIKLGIARALVQYNPDYRAKLKPLGFLTRDARVVERKKYGKHKARRAPQYSK-
6	HHPRED-g	3bbn_I	0.452	0.969	4.509	threading_6	----TVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGPLWLQYVKTPLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEGLLTRDSRIVERKKPGLKKARKAPQFSKR
7	SP3	1fjgi	0.535	0.977	4.890	threading_7	---EQYYGTGRRKEAVARVFLRPGNGKVTVNGQDFNEYFQGLVRAVAALEPLRAVDALGRFDAYITVRGGGKSGQIDAIKLGIARALVQYNPDYRAKLKPLGFLTRDARVVERKKYGKHKARRAPQYSKR
8	SAM-T99	3e1cW	1.000	0.977	5.890	threading_8	---NQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRKARRRPQFSKR
9	MUSTER	1n32I	0.535	0.977	4.552	threading_9	---EQYYGTGRRKEAVARVFLRPGNGKVTVNGQDFNEYFQGLVRAVAALEPLRAVDALGRFDAYITVRGGGKSGQIDAIKLGIARALVQYNPDYRAKLKPLGFLTRDARVVERKKYGKHKARRAPQYSKR
10	SPARKS	1s1hi	0.365	0.969	4.276	threading_10	---PSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPE-ILRFKVYEPLLLVDKFSNIDIRVRVTGGGHVSQVYAIRQAIAKGLVAYDEQSKNELKKATLLIADSRRPEPKKFGGKGARSRFQKSYR

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.917 to 2avyI TM-score=0.925 to native SCOP code=d.14.1.1	TM-score=0.710 to 2avyI TM-score=0.715 to native SCOP code=d.14.1.1	TM-score=0.916 to 1n32I TM-score=0.897 to native SCOP code=d.14.1.1	TM-score=0.827 to 1n32I TM-score=0.825 to native SCOP code=d.14.1.1	TM-score=0.710 to 2avyI TM-score=0.715 to native SCOP code=d.14.1.1

Experimental Structure

Download 1vs5I

SCOP code=d.14.1.1