Template-based Modeling Results for RL32_ECOLI

Submitted Primary Sequence

>Length 57
MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHITADGYYRGRKVIAK
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--------10--------20--------30--------40--------50

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHITADGYYRGRKVIAK
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECC
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--------10--------20--------30--------40--------50

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHITADGYYRGRKVIAK
452333332413312220111121110010151223332311011112141111226
123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHITADGYYRGRKVIAK
1	MUSTER	3df40	1.000	0.982	4.780	threading_1	-AVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHITADGYYRGRKVIAK
2	SPARKS	1nkwz	0.429	0.982	3.614	threading_2	HPVPKKKTSKSKRDMRRSHHALTAPNLTECPQCHGKKLSHHICPNCGYYDGRQVLA-
3	PROSPECT2	2aw40	1.000	0.982	1.236	threading_3	-AVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHITADGYYRGRKVIAK
4	PPA-I	1pnuZ	0.429	0.982	8.083	threading_4	HPVPKKKTSKSKRDMRRSHHALTAPNLTECPQCHGKKLSHHICPNCGYYDGRQVLA-
5	HHPRED-l	2j01_5	0.339	0.982	5.310	threading_5	HPVPKKKTSKARRDARRSHHALTPPTLVPCPECKAMKPPHTVCPECGYYAGRKVLE-
6	HHPRED-g	2j01_5	0.333	1.000	4.607	threading_6	HPVPKKKTSKARRDARRSHHALTPPTLVPCPECKAMKPPHTVCPECGYYAGRKVLEV
7	SP3	1nkwz	0.429	0.982	3.512	threading_7	HPVPKKKTSKSKRDMRRSHHALTAPNLTECPQCHGKKLSHHICPNCGYYDGRQVLA-
8	SAM-T99	1pnuZ	0.500	0.947	3.509	threading_8	-PVPKKKTSKSKRDMRRSHHALTAPN-LTECPQCHGKKLSHHICPCGYYDGRQVLA-
9	MUSTER	2aw40	1.000	0.982	4.665	threading_9	-AVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHITADGYYRGRKVIAK
10	SPARKS	1p85z	1.000	0.509	1.029	threading_10	---------------------------LSVDKTSGEKHLRHHITADGYYRGRKVIA-

Predicted Tertiary Structure


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TM-score=0.587 to 3df40 TM-score=0.392 to native SCOP code=g.41.8.5	TM-score=0.539 to 1pnuZ TM-score=0.410 to native SCOP code=i.1.1.1	TM-score=0.597 to 1pnuZ TM-score=0.487 to native SCOP code=i.1.1.1	TM-score=0.622 to 2aw40 TM-score=0.634 to native SCOP code=g.41.8.5	TM-score=0.470 to 1pnuZ TM-score=0.430 to native SCOP code=i.1.1.1

Experimental Structure

Download 1vs60

SCOP code=g.41.8.5