Template-based Modeling Results for RL31B_ECOLI

Submitted Primary Sequence

>Length 87
MKPNIHPEYRTVVFHDTSVDEYFKIGSTIKTDREIELDGVTYPYVTIDVSSKSHPFYTGKLRTVASEGNVARFTQRFGRFVSTKKGA
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKPNIHPEYRTVVFHDTSVDEYFKIGSTIKTDREIELDGVTYPYVTIDVSSKSHPFYTGKLRTVASEGNVARFTQRFGRFVSTKKGA
CCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCEEEECCEECCEEEEEECCCCCCEEECCEEEEECCCCHHHHHHHHCCCCCCCCCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKPNIHPEYRTVVFHDTSVDEYFKIGSTIKTDREIELDGVTYPYVTIDVSSKSHPFYTGKLRTVASEGNVARFTQRFGRFVSTKKGA
553310141120001001132202010002243202121221220101011401000113110002311022003202422234434
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKPNIHPEYRTVVFHDTSVDEYFKIGSTIKTDREIELDGVTYPYVTIDVSSKSHPFYTGKLRTVASEGNVARFTQRFGRFVSTKKGA
1	MUSTER	2hgu3	0.366	0.816	2.749	threading_1	MKEGIHPKLVPARIIC-GCGNVIETYST-------------KPEIYVEVCSKCHPFYTGQQRFVDTEGRVERFQRRYGDSYRKGR--
2	SPARKS	2j28z	0.457	0.805	3.102	threading_2	MKKDIHPKYEEITAS-CSCGNVMKIRSTVGHD------------LNLDVCSKCHPFFTGKQRDVATGGRVDRFNKRFNIPGSK----
3	PROSPECT2	1nkwy	0.288	0.839	1.125	threading_3	MQKDLHPKAVPCKIIY--------------QGQVVMETMSTRPEIHVDVWSGVHPFWTGEERFLDTEGRVDKFNKRFGDSYRRGSKK
4	PPA-I	3kit4	0.386	0.655	3.939	threading_4	MKEGIHPKLVPARIIC-GCGNVIETYST-------------KPEIYVEVCSKCHPFYTGQQRFVDTEGRVE----------------
5	HHPRED-l	1nkw_Y	0.306	0.828	5.119	threading_5	MQKDLHPKAVPCKII-YQGQVVMETMSTR-------------PEIHVDVWSGVHPFWTGEERFLDTEGRVDKFNKRFGDSYRRGSK-
6	HHPRED-g	1nkw_Y	0.288	0.839	4.077	threading_6	MQKDLHPKAVPCKIIY-QGQVVMET-------------MSTRPEIHVDVWSGVHPFWTGEERFLDTEGRVDKFNKRFGDSYRRGSKK
7	SP3	2j28z	0.457	0.805	1.850	threading_7	MKKDIHPKYEEITAS-CSCGNVMKIRSTVGHD------------LNLDVCSKCHPFFTGKQRDVATGGRVDRFNKRFNIPGSK----
8	SAM-T99	1vs8Z	0.457	0.805	4.123	threading_8	MKKDIHPKYEEIT-ASCSCGNVMKIRSTVGHD------------LNLDVCSKCHPFFTGKQRDVATGGRVDRFNKRFNIPGSK----
9	MUSTER	1vs8Z	0.457	0.805	2.749	threading_9	MKKDIHPKYEEITASC-SCGNVMKIRSTVGHD------------LNLDVCSKCHPFFTGKQRDVATGGRVDRFNKRFNIPGSK----
10	SPARKS	1nkwy	0.301	0.839	2.940	threading_10	MQKDLHPKAVPCKII-YQGQVVMETMST-------------RPEIHVDVWSGVHPFWTGEERFLDTEGRVDKFNKRFGDSYRRGSKK

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.595 to 2hgu3 SCOP code=d.325.1.2	TM-score=0.537 to 3dllU SCOP code=d.325.1.1	TM-score=0.754 to 2awbZ SCOP code=d.325.1.2	TM-score=0.531 to 3dllU SCOP code=d.325.1.1	TM-score=0.371 to 3dbhI SCOP code=k.45.1.1