Template-based Modeling Results for RL31_ECOLI

Submitted Primary Sequence

>Length 70
MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFFTGKQRDVATGGRVDRFNKRFNIPGSK
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--------10--------20--------30--------40--------50--------60--------70

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFFTGKQRDVATGGRVDRFNKRFNIPGSK
CCCCCCCCCEEEEEEECCCCEEEECCCCCCCEEEEECCCCCCEECCCEEEEECCCCHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFFTGKQRDVATGGRVDRFNKRFNIPGSK
5543101411201000111110203122242010101130110021211100221203201431333244
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--------10--------20--------30--------40--------50--------60--------70

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFFTGKQRDVATGGRVDRFNKRFNIPGSK
1	MUSTER	1vs8Z	1.000	1.000	4.350	threading_1	MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFFTGKQRDVATGGRVDRFNKRFNIPGSK
2	SPARKS	2j28z	1.000	1.000	5.136	threading_2	MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFFTGKQRDVATGGRVDRFNKRFNIPGSK
3	PROSPECT2	2aw4Z	1.000	1.000	1.326	threading_3	MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFFTGKQRDVATGGRVDRFNKRFNIPGSK
4	PPA-I	2awbZ	1.000	1.000	6.673	threading_4	MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFFTGKQRDVATGGRVDRFNKRFNIPGSK
5	HHPRED-l	1nkw_Y	0.426	0.971	5.169	threading_5	MQKDLHPKAVPCKIIYQGQVVMETMST-RPEIHVDVWSGVHPFWTGEERFLDTEGRVDKFNKRFGDSYR-
6	HHPRED-g	1nkw_Y	0.420	0.986	4.389	threading_6	MQKDLHPKAVPCKIIYQGQVVMETMST-RPEIHVDVWSGVHPFWTGEERFLDTEGRVDKFNKRFGDSYRR
7	SP3	2j28z	1.000	1.000	2.705	threading_7	MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFFTGKQRDVATGGRVDRFNKRFNIPGSK
8	SAM-T99	1vs8Z	1.000	1.000	4.253	threading_8	MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFFTGKQRDVATGGRVDRFNKRFNIPGSK
9	MUSTER	2awbZ	1.000	1.000	4.345	threading_9	MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFFTGKQRDVATGGRVDRFNKRFNIPGSK
10	SPARKS	1nkwy	0.420	0.986	4.187	threading_10	MQKDLHPKAVPCKIIYQGQVVMETMST-RPEIHVDVWSGVHPFWTGEERFLDTEGRVDKFNKRFGDSYRR

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.832 to 1vs8Z TM-score=0.699 to native SCOP code=d.325.1.2	TM-score=0.492 to 1tdjA TM-score=0.260 to native SCOP code=c.79.1.1	TM-score=0.820 to 2awbZ TM-score=0.696 to native SCOP code=d.325.1.2	TM-score=0.803 to 2i2vX TM-score=0.931 to native SCOP code=d.325.1.1	TM-score=0.890 to 2awbZ TM-score=0.752 to native SCOP code=d.325.1.2

Experimental Structure

Download 1vs6Z

SCOP code=d.325.1.1