Template-based Modeling Results for RL23_ECOLI

Submitted Primary Sequence

>Length 100
MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE
CCCHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCCEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE
5431320130021010121012014422100020043022210220023004031220000003132221132213333111000103422201012235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE
1	MUSTER	1n88A	0.417	0.960	4.051	threading_1	MKT---AYDVILAPVLSEKAYAGFAE-GKYTFWVHPKATKTEIKNAVETAFKVKVVKVNTLHVRGKKKRLGRYLGKRPDRKKAIVQVAPGQKIEALEGLI
2	SPARKS	1nkwr	0.452	0.930	3.442	threading_2	-----SHYDILQAPVISEKAYSAME-RGVYSFWVSPKATKTEIKDAIQQAFGVRVIGISTMNVPGKRKRVGRFIGQRNDRKKAIVRLAEGQSIEALAGQ-
3	PROSPECT2	3pyoT	0.424	0.920	1.994	threading_3	TAY-----DVILAPVLSEKAYAGFA-EGKYTFWVHPKATKTEIKNAVETAFKVKVVKVNTLHVRGKKKRLGRYLGKRPDRKKAIVQVAPGQKIEALEG--
4	PPA-I	1n88A	0.417	0.960	6.204	threading_4	MKT---AYDVILAPVLSEKAYAGFAE-GKYTFWVHPKATKTEIKNAVETAFKVKVVKVNTLHVRGKKKRLGRYLGKRPDRKKAIVQVAPGQKIEALEGLI
5	HHPRED-l	3r8s_T	1.000	0.930	4.631	threading_5	MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNL-------
6	HHPRED-g	3pyt_T	0.424	0.920	3.886	threading_6	-----TAYDVILAPVLSEKAYAGFAE-GKYTFWVHPKATKTEIKNAVETAFKVKVVKVNTLHVRGKKKRLGRYLGKRPDRKKAIVQVAPGQKIEALEG--
7	SP3	1nkwr	0.452	0.930	3.619	threading_7	-----SHYDILQAPVISEKAYSAME-RGVYSFWVSPKATKTEIKDAIQQAFGVRVIGISTMNVPGKRKRVGRFIGQRNDRKKAIVRLAEGQSIEALAGQ-
8	SAM-T99	3iy9T	1.000	0.990	4.251	threading_8	MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGA-
9	MUSTER	3iy9T	1.000	0.990	3.879	threading_9	MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGA-
10	SPARKS	1s1it	0.434	0.760	2.818	threading_10	-------YKVIEQPITSETAMKKVEDGNILVFQVSMKANKYQIKKAVKELYEVDVLKVNTLVRPNGTK-------------KAYVRLTADYDLDIA----

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.947 to 1n88A TM-score=0.745 to native SCOP code=d.12.1.1	TM-score=0.938 to 1n88A TM-score=0.740 to native SCOP code=d.12.1.1	TM-score=0.810 to 2aarR TM-score=0.722 to native SCOP code=d.12.1.1	TM-score=0.855 to 2aarR TM-score=0.746 to native SCOP code=d.12.1.1	TM-score=0.947 to 1n88A TM-score=0.745 to native SCOP code=d.12.1.1

Experimental Structure

Download 1vs6T

SCOP code=d.12.1.1