Template-based Modeling Results for RL22_ECOLI

Submitted Primary Sequence

>Length 110
METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSDR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSDR
CEEEEEECCCEECHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSDR
31110212202001310110012022230220021021133300210120021001101322203230010110001312213301120302033123310201010235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSDR
1	MUSTER	2qovS	1.000	1.000	4.523	threading_1	METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSDR
2	SPARKS	1bxea	0.565	0.982	4.651	threading_2	-EAKAIARYVRISPRKVRLVVDLIRGKSLEEARNILRYTNKRGAYFVAKVLESAAANAVNNHD-LEDRLYVKAAYVDEGPALKRVLPRARGRADIIKKRTSHITVILGEK
3	PROSPECT2	3bboU	0.355	1.000	2.272	threading_3	DEITTRGYSISMSVDKARRVIDQIRGRSYAETLMILELMPYRACYPIFKLIYSAAANASHNKQFNKANLIISKAEVNKGITLKKVKPRARGRSYMILRPTCHITIVLRDI
4	PPA-I	2aw4S	1.000	1.000	5.398	threading_4	METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSDR
5	HHPRED-l	1i4j_A	0.575	0.964	4.525	threading_5	MEAKAIARYVRISPRKVRLVVDLIRGKSLEEARNILRYTNKRGAYFVAKVLESAAANAVNNHDALEDRLYVKAAYVDEGPAVL---PRARGRADIIKKRTSHITVILGE-
6	HHPRED-g	3bbo_U	0.355	1.000	4.225	threading_6	DEITTRGYSISMSVDKARRVIDQIRGRSYAETLMILELMPYRACYPIFKLIYSAAANASHNKQFNKANLIISKAEVNKGITLKKVKPRARGRSYMILRPTCHITIVLRDI
7	SP3	1bxea	0.565	0.982	4.289	threading_7	-EAKAIARYVRISPRKVRLVVDLIRGKSLEEARNILRYTNKRGAYFVAKVLESAAANAVNNHD-LEDRLYVKAAYVDEGPALKRVLPRARGRADIIKKRTSHITVILGEK
8	SAM-T99	2qovS	1.000	1.000	5.241	threading_8	METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSDR
9	MUSTER	2aw4S	1.000	1.000	4.488	threading_9	METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSDR
10	SPARKS	1jj2q	0.239	0.991	3.570	threading_10	TTAKAMLRERQMSFKHSKAIAREIKGKTAGEAVDYLEAYPEKASKAFLDLLENAVGNADH-QGFDGEAMTIKHVAAHKVGEQQGRKPRAMGRASAWNSPQVDVELILEEP

Predicted Tertiary Structure


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TM-score=0.989 to 2qovS TM-score=0.909 to native SCOP code=d.55.1.1	TM-score=0.989 to 2qovS TM-score=0.909 to native SCOP code=d.55.1.1	TM-score=0.904 to 2qovS TM-score=0.862 to native SCOP code=d.55.1.1	TM-score=0.917 to 3bboU TM-score=0.830 to native SCOP code=i.1.1.1	TM-score=0.977 to 2aw4S TM-score=0.964 to native SCOP code=d.55.1.1

Experimental Structure

Download 1vs6S

SCOP code=d.55.1.1