Template-based Modeling Results for RL21_ECOLI

Submitted Primary Sequence

>Length 103
MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGISA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGISA
CEEEEEECCEEEEEECCCEEEEECCCCCCCCEEEEEEEEEEECCCCEEECCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGISA
2000010212102023111020220323332202001000012232020112104302020100121424302002123333233332122300100021035
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGISA
1	MUSTER	3d5bV	0.436	0.981	3.679	threading_1	MFAIVKTGGKQYRVEPGLKLRVEKLDAEPGATVELPVLLL--GGEKTVVGTPVVEGASVVAEVLGHGRGKKILVSKFKAKVQYRRKKGHRQPYTELLIKEIRG
2	SPARKS	1nkwp	0.430	0.971	3.336	threading_2	MFAIIQTGGKQYRVSEGDVIRVESLQGEAGDKVELKALFV---GGEQTVFGEDAGKYTVQAEVVEHGRGKKIYIRKYKSGVQYRRRTGHRQNFTAIKILGIQG
3	PROSPECT2	3pyoR	0.436	0.981	2.182	threading_3	MFAIVKTGGKQYRVEPGLKLRVEKLDAEPGATVELPVLLL--GGEKTVVGTPVVEGASVVAEVLGHGRGKKILVSKFKAKVQYRRKKGHRQPYTELLIKEIRG
4	PPA-I	3d5bV	0.436	0.981	5.687	threading_4	MFAIVKTGGKQYRVEPGLKLRVEKLDAEPGATVELPVLLL--GGEKTVVGTPVVEGASVVAEVLGHGRGKKILVSKFKAKVQYRRKKGHRQPYTELLIKEIRG
5	HHPRED-l	3r8s_R	1.000	0.990	6.115	threading_5	MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGIS-
6	HHPRED-g	3r8s_R	1.000	1.000	5.187	threading_6	MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGISA
7	SP3	1nkwp	0.410	0.971	2.134	threading_7	MFAIIQTGGKQYRVSEGDVIRVESLQGEAGDKVELKALFVGGE---QTVFGEDAGKYTVQAEVVEHGRGKKIYIRKYKSGVQYRRRTGHRQNFTAIKILGIQG
8	SAM-T99	2j28R	1.000	1.000	5.062	threading_8	MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGISA
9	MUSTER	3bboT	0.301	1.000	3.590	threading_9	IFAVVVIGSRQYIVIPGRWIYTQRLKATVNDKIVLNKVLLVGTKASTYIGTPIVTNAAVHAVVEEQLLDDKVIVFKYKKKKNYRRNIGHRQPITRIKITGITG
10	SPARKS	1jjua3	0.153	0.699	0.739	threading_10	--------------AAPQVLAVAPARLKIGEE---TQLRVAGTGLG---SDLTL-PEGVAGSVESAGNG--VTVLKL----TATGTPG----PVSLELGGQKV

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.858 to 3d5bV TM-score=0.656 to native SCOP code=b.155.1.1	TM-score=0.858 to 3d5bV TM-score=0.656 to native SCOP code=b.155.1.1	TM-score=0.913 to 1nkwP TM-score=0.728 to native SCOP code=i.1.1.2	TM-score=0.827 to 3d5bV TM-score=0.638 to native SCOP code=b.155.1.1	TM-score=0.858 to 3d5bV TM-score=0.656 to native SCOP code=b.155.1.1

Experimental Structure

Download 1vs6R

SCOP code=b.155.1.1