Template-based Modeling Results for RL16_ECOLI

Submitted Primary Sequence

>Length 136
MLQPKRTKFRKMHKGRNRGLAQGTDVSFGSFGLKAVGRGRLTARQIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLQPKRTKFRKMHKGRNRGLAQGTDVSFGSFGLKAVGRGRLTARQIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM
CCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCEECHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEECCCCCEECCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLQPKRTKFRKMHKGRNRGLAQGTDVSFGSFGLKAVGRGRLTARQIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM
5522342323321313241213022000010001001202021310100120013104330200010001100022122122141312021000002102000102111230022002100330112011022224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLQPKRTKFRKMHKGRNRGLAQGTDVSFGSFGLKAVGRGRLTARQIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM
1	MUSTER	2qamM	1.000	1.000	4.792	threading_1	MLQPKRTKFRKMHKGRNRGLAQGTDVSFGSFGLKAVGRGRLTARQIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM
2	SPARKS	1njmk	0.553	0.904	4.666	threading_2	------TKFRKQFRGRMTGDAGGDYVAFGDYGLIAMEPAWIKSNQIEACRIVMSRHFRRGGKIYIRIFPDKPVTKKPAETRMGKGKGAVEYWVSVVKPGRVMFEVAGVTEEQAKEAFRLAGHKLPIQTK-------
3	PROSPECT2	3pyoM	0.557	0.963	3.358	threading_3	-----RMKYRKQQRGRLKGATKGDYVAFGDFGLVALEPAWITAQQIEAARVAMVRHFRRGGKIFIRIFPDKPYTKKPLEVRMGKGKGNVEGYVAVVKPGRVMFEVAGVTEEQAMEALRIAGHKLPIKTKIVRRDAY
4	PPA-I	2qamM	1.000	1.000	6.192	threading_4	MLQPKRTKFRKMHKGRNRGLAQGTDVSFGSFGLKAVGRGRLTARQIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM
5	HHPRED-l	3bbo_O	0.537	0.985	5.434	threading_5	MLSPKRTRFRKQHRGRMKGIYRGNRICFGRYALQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARRAVAIAASKMPIRTQFIISG--
6	HHPRED-g	3bbo_O	0.537	0.985	5.021	threading_6	MLSPKRTRFRKQHRGRMKGISRGNRICFGRYALQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARRAVAIAASKMPIRTQFIISG--
7	SP3	1njmk	0.553	0.904	4.696	threading_7	------TKFRKQFRGRMTGDAGGDYVAFGDYGLIAMEPAWIKSNQIEACRIVMSRHFRRGGKIYIRIFPDKPVTKKPAETRMGKGKGAVEYWVSVVKPGRVMFEVAGVTEEQAKEAFRLAGHKLPIQTK-------
8	SAM-T99	2qamM	1.000	1.000	6.015	threading_8	MLQPKRTKFRKMHKGRNRGLAQGTDVSFGSFGLKAVGRGRLTARQIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM
9	MUSTER	3bboO	0.537	0.985	4.384	threading_9	MLSPKRTRFRKQHRGRMKGISRGNRICFGRYALQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARRAVAIAASKMPIRTQFIISG--
10	SPARKS	1jj2h	0.212	0.971	3.043	threading_10	--KPRNSSKPAYTRREISGIPGGNNGAGPTVELVVEKPVQIRHNALEAARVAANRYVQNSGKFRIRKFPFHVIRENKDGMRAPFGK--PVGTAARVHGANHIFIAWVNPDPNVEEAWRRAKMKVTPTINIDSSPAG

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.992 to 2qamM TM-score=0.847 to native SCOP code=d.41.4.2	TM-score=0.992 to 2qamM TM-score=0.847 to native SCOP code=d.41.4.2	TM-score=0.806 to 2qamM TM-score=0.812 to native SCOP code=d.41.4.2	TM-score=0.890 to 2qamM TM-score=0.814 to native SCOP code=d.41.4.2	TM-score=0.992 to 2qamM TM-score=0.847 to native SCOP code=d.41.4.2

Experimental Structure

Download 1vs6M

SCOP code=d.41.4.2