Template-based Modeling Results for RL14_ECOLI

Submitted Primary Sequence

>Length 123
MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGPVTRELRSEKFMKIISLAPEVL
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGPVTRELRSEKFMKIISLAPEVL
CCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCEECCEEEEEEEEEEEEEEEECCCCEEECCCEEEEEEECCCCCCCCCEEEEEEHHHHHHCCCCCHHCCCCCCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGPVTRELRSEKFMKIISLAPEVL
541320001001112022000010021232420200000000022123413132121020000102120212311002111000000133233221120100002103423112011102324
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGPVTRELRSEKFMKIISLAPEVL
1	MUSTER	487dM	0.689	0.992	4.104	threading_1	MIQQESRLKVADNSGAREVLVIKVLGGSGRRYANIGDVVVATVKDATPGGVVKKGQVVKAVVVRTKRGVRRPDGSYIRFDENACVIIRDDK-SPRGTRIFGPVARELRDKDFMKIISLAPEVI
2	SPARKS	1whi_	0.689	0.992	5.182	threading_2	MIQQESRLKVADNSGAREVLVIKVLGGSGRRYANIGDVVVATVKDATPGGVVKKGQVVKAVVVRTKRGVRRPDGSYIRFDENACVIIRDDKS-PRGTRIFGPVARELRDKDFMKIISLAPEVI
3	PROSPECT2	3pyoK	0.705	0.992	2.983	threading_3	MIQPQTYLEVADNTGARKIMCIRVLKGSNAKYATVGDVIVASVKEAIPRGAVKEGDVVKAVVVRTKKEVKRPDGSAIRFDDNAAVIINNQLE-PRGTRVFGPVARELREKGFMKIVSLAPEVL
4	PPA-I	487dM	0.689	0.992	4.798	threading_4	MIQQESRLKVADNSGAREVLVIKVLGGSGRRYANIGDVVVATVKDATPGGVVKKGQVVKAVVVRTKRGVRRPDGSYIRFDENACVIIRDDKS-PRGTRIFGPVARELRDKDFMKIISLAPEVI
5	HHPRED-l	1whi_A	0.694	0.984	5.701	threading_5	MIQQESRLKVADNSGAREVLVIKVLGGSGRRYANIGDVVVATVKDATPGGVVKKGQVVKAVVVRTKRGVRRPDGSYIRFDENACVIIRDDK-SPRGTRIFGPVARELRDKDFMKIISLAPEV-
6	HHPRED-g	1whi_A	0.689	0.992	4.749	threading_6	MIQQESRLKVADNSGAREVLVIKVLGGSGRRYANIGDVVVATVKDATPGGVVKKGQVVKAVVVRTKRGVRRPDGSYIRFDENACVIIRDDK-SPRGTRIFGPVARELRDKDFMKIISLAPEVI
7	SP3	1whi_	0.689	0.992	5.163	threading_7	MIQQESRLKVADNSGAREVLVIKVLGGSGRRYANIGDVVVATVKDATPGGVVKKGQVVKAVVVRTKRGVRRPDGSYIRFDENACVIIRDDKS-PRGTRIFGPVARELRDKDFMKIISLAPEVI
8	SAM-T99	2gyaI	1.000	0.992	5.409	threading_8	-IQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGPVTRELRSEKFMKIISLAPEVL
9	MUSTER	2gyaI	1.000	0.992	4.006	threading_9	-IQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGPVTRELRSEKFMKIISLAPEVL
10	SPARKS	1jj2j	0.373	0.959	4.465	threading_10	GLEKGSLITCADNTGARELKVISVHGYSGTKKAGLGDKITVSVTKGTPE---MRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIVDENED-PRGTELKGPIAREVA-QRFGSVASAATMIV

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.994 to 487dM TM-score=0.869 to native SCOP code=i.1.1.2	TM-score=0.994 to 2gyaI TM-score=0.856 to native SCOP code=b.39.1.1	TM-score=0.931 to 487dM TM-score=0.915 to native SCOP code=i.1.1.2	TM-score=0.926 to 2zjrH TM-score=0.923 to native SCOP code=b.39.1.1	TM-score=0.993 to 487dM TM-score=0.870 to native SCOP code=i.1.1.2

Experimental Structure

Download 1vt2K

SCOP code=b.39.1.1