Template-based Modeling Results for RL9_ECOLI

Submitted Primary Sequence

>Length 149
MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADAVTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADAVTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE
CEEEECCCCCCCCCCCCEEEECCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEECCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEEEEEEECCCCEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADAVTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE
21100133123113212102022010200001212022013300310222213131322212210212033033121010102123312010200131002002322231231102123120321020202010133020202021235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADAVTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE
1	MUSTER	2gyaF	1.000	1.000	4.453	threading_1	MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADAVTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE
2	SPARKS	1div_	0.388	0.987	4.894	threading_2	MKVIFLKDVKGKGKKGEIKNVADGYANNFLFKQGLAIEATPANLKALEAQKQKEQRQAAEELANAKKLKEQLEKLT-VTIPAKAGEGGRLFGSITSKQIAESLQAQGLKLDKRKIELAD-AIRALGYTNVPVKLHPEVTATLKVHVTEQ
3	PROSPECT2	3pyoH	0.396	0.966	3.351	threading_3	MKVILLEPLENLGDVGQVVDVKPGYARNYLLPRGLAVLATESNLKALEARIRAQAKRLAERKAEAERLKEILENL-TLTIPVRAGE-TKIYGSVTAKDIAEALSRQGITIDPKRLALEKP-IKELGEYVLTYKPHPEVPIQLKVSVV--
4	PPA-I	2gyaF	1.000	1.000	5.024	threading_4	MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADAVTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE
5	HHPRED-l	1div_A	0.397	0.980	5.707	threading_5	MKVIFLKDVKGKGKKGEIKNVADGYANNFLFKQGLAIEATPANLKALEAQKQKEQRQAAEELANAKKLKEQLEKL-TVTIPAKAGEGGRLFGSITSKQIAESLQAHGLKLDKRKIELA-DAIRALGYTNVPVKLHPEVTATLKVHVTE-
6	HHPRED-g	1div_A	0.395	0.987	5.087	threading_6	MKVIFLKDVKGKGKKGEIKNVADGYANNFLFKQGLAIEATPANLKALEAQKQKEQRQAAEELANAKKLKEQLEKL-TVTIPAKAGEGGRLFGSITSKQIAESLQAQGLKLDKRKIELA-DAIRALGYTNVPVKLHPEVTATLKVHVTEQ
7	SP3	1div_	0.388	0.987	5.250	threading_7	MKVIFLKDVKGKGKKGEIKNVADGYANNFLFKQGLAIEATPANLKALEAQKQKEQRQAAEELANAKKLKEQLEKLT-VTIPAKAGEGGRLFGSITSKQIAESLQAQGLKLDKRKIELAD-AIRALGYTNVPVKLHPEVTATLKVHVTEQ
8	SAM-T99	3i1tH	1.000	1.000	3.715	threading_8	MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADAVTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE
9	MUSTER	1divA	0.395	0.987	4.236	threading_9	MKVIFLKDVKGKGKKGEIKNVADGYANNFLFKQGLAIEATPANLKALEAQKQKEQRQAAEELANAKKLKEQLEKL-TVTIPAKAGEGGRLFGSITSKQIAESLQAQGLKLDKRKIELAD-AIRALGYTNVPVKLHPEVTATLKVHVTEQ
10	SPARKS	1div_1	0.370	0.617	2.835	threading_10	-------------------------------------------------------RQAAEELANAKKLKEQLEKLT-VTIPAKAGEGGRLFGSITSKQIAESLQAQGLKLDKRKIELAD-AIRALGYTNVPVKLHPEVTATLKVHVTEQ

Predicted Tertiary Structure


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TM-score=0.847 to 2gyaF TM-score=0.604 to native SCOP code=d.99.1.1	TM-score=0.847 to 2gyaF TM-score=0.604 to native SCOP code=d.99.1.1	TM-score=0.806 to 487dK TM-score=0.757 to native SCOP code=i.1.1.2	TM-score=0.670 to 1divA TM-score=0.597 to native SCOP code=d.99.1.1	TM-score=0.847 to 2gyaF TM-score=0.604 to native SCOP code=d.99.1.1

Experimental Structure

Download 1vs6H

SCOP code=i.1.1.1