Template-based Modeling Results for RNK_ECOLI

Submitted Primary Sequence

>Length 136
MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL
CCCCCEEEEHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHCCEEECCCCCCCCEECCCCEEEEEECCCCCEEEEEEECHHHCCCCCCCEECCCHHHHHHHCCCCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL
5531201001100310220133022112310210121033020012331332202120202022233322210100022312333210011010000012132122020202312212010010212132223224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL
1	MUSTER	3bmbA	1.000	0.993	4.659	threading_1	-SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL
2	SPARKS	3bmba	1.000	0.993	4.586	threading_2	-SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL
3	PROSPECT2	3bmbA	1.000	0.993	3.106	threading_3	-SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL
4	PPA-I	3bmbA	1.000	0.993	8.112	threading_4	-SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL
5	HHPRED-l	2pn0_A	0.488	0.890	6.262	threading_5	--KPKI-ISSLDAERLEILLETLSQNAFPGRDDLEAELARAEVVDPEEIPPTVVT-NSTVRFRVESSAEEF-LTLVYPKDVDTSGEKISILAPVGSALLGLAQGDEIEWPKPGGGVLRVRIVEVTY----------
6	HHPRED-g	2pn0_A	0.488	0.890	5.163	threading_6	--KPKI-ISSLDAERLEILLETLSQNAFPGRDDLEAELARAEVVDPEEIPPTVVT-NSTVRFRVESSAEEF-LTLVYPKDVDTSGEKISILAPVGSALLGLAQGDEIEWPKPGGGVLRVRIVEVTY----------
7	SP3	3bmba	1.000	0.993	4.629	threading_7	-SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL
8	SAM-T99	3bmbA	1.000	0.993	4.685	threading_8	-SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL
9	MUSTER	2pn0A	0.471	0.890	3.402	threading_9	--KPKII-SSLDAERLEILLETLSQNAFPGRDDLEAELARAEVVDPEEIPPT-VVTNSTVRFRVESSAE-EFLTLVYPKDVDTSGEKISILAPVGSALLGLAQGDEIEWPKPGGGVLRVRIVEVTY----------
10	SPARKS	2p4va	0.200	0.919	3.746	threading_10	EERPEVTKKVTWAASLGDRSENADYQYNRRVRYLTKCMENLKIVDYSPQQEGKVFFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAG-EASWYVNAIEYV---------

Predicted Tertiary Structure


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TM-score=0.624 to 1grjA TM-score=0.999 to native SCOP code=a.2.1.1	TM-score=0.624 to 1grjA TM-score=0.999 to native SCOP code=a.2.1.1	TM-score=0.624 to 1grjA TM-score=0.999 to native SCOP code=a.2.1.1	TM-score=0.624 to 1grjA TM-score=0.999 to native SCOP code=a.2.1.1	TM-score=0.624 to 1grjA TM-score=0.999 to native SCOP code=a.2.1.1

Experimental Structure

Download 3bmbA

SCOP code=a.2.1.1