Template-based Modeling Results for LPRH_ECOLI


  Submitted Primary Sequence

>Length 33
MRSEQISGSSLNPSCRFSSAYSPVTRQRKDMSR
123456789012345678901234567890123
--------10--------20--------30
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRSEQISGSSLNPSCRFSSAYSPVTRQRKDMSR
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
123456789012345678901234567890123
--------10--------20--------30
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MRSEQISGSSLNPSCRFSSAYSPVTRQRKDMSR
553332222211120312221021222333225
123456789012345678901234567890123
--------10--------20--------30
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMRSEQISGSSLNPSCRFSSAYSPVTRQRKDMSR
1SPARKS1bhi_0.2190.9701.057threading_1MSDDKPFLCT-APGCRFTNEHLAVHKHKHEMTL
2PPA-I1ztoA0.2190.9701.266threading_2MVSAESSGCNSHMPYGYAAQARARERERLAHS-
3SPARKS2i3tb0.1521.0001.015threading_3MKPEKIDCNFKLIYCELEFSLEEVLAISRNVYK
4PPA-I1sv1C0.1521.0001.184threading_4AMAGIISGTPTRISVDEKTELARIAKGMQDLES
5PPA-I1jmuA0.2121.0001.105threading_5TINVTGDGNVFKPSAETSSTAVPSLSLSPGMLN
6PPA-I2esyA0.2410.8791.057threading_6----SPPDYSAAPRGRFGIPFFPVHLKRLLILL
7PPA-I3ha6B0.2731.0001.012threading_7MSQVKSSYSYDAPSINFSSLNIDSWFEEKANLE
8MUSTER1c7kA0.3230.9390.761threading_8PCSELMSGGGPGPSC--TNPYNAQERSRVNALW
9SPARKS2c1tc0.2580.9390.963threading_9VADAQIQRETYDSNTKVAS--SAVMNRRKAMPK
10PROSPECT22eluA0.3330.9090.498threading_10GSS---GSSGIKQHCRFCKKYSDVIRDAHDPQD

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.320 to 1e9kA
SCOP code=j.87.1.1
TM-score=0.512 to 5znfA
SCOP code=g.37.1.1
TM-score=0.476 to 1p71A
SCOP code=a.55.1.1
TM-score=0.331 to 1jmuA
SCOP code=e.35.1.1
TM-score=0.393 to 1ea4F
SCOP code=a.43.1.3