Template-based Modeling Results for REND_ECOLI

Submitted Primary Sequence

>Length 100
MTGKEAIIHYLGTHKSFCAQDVAAVTGATVTSINQAAAKMARAGILVVDGKVWRTVYYRFATREEWEGKVSTNLIFKECRQSAAMKRVLRVYKRTSMGTQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTGKEAIIHYLGTHKSFCAQDVAAVTGATVTSINQAAAKMARAGILVVDGKVWRTVYYRFATREEWEGKVSTNLIFKECRQSAAMKRVLRVYKRTSMGTQ
CCHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEHHHHHHHHHHCCEEEEEECCCEEEEEECCCHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTGKEAIIHYLGTHKSFCAQDVAAVTGATVTSINQAAAKMARAGILVVDGKVWRTVYYRFATREEWEGKVSTNLIFKECRQSAAMKRVLRVYKRTSMGTQ
5512200111012142000310032010100001200120132000002032111000111233223332112100320321210120021132223234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTGKEAIIHYLGTHKSFCAQDVAAVTGATVTSINQAAAKMARAGILVVDGKVWRTVYYRFATREEWEGKVSTNLIFKECRQSAAMKRVLRVYKRTSMGTQ
1	MUSTER	3f6vA	0.174	0.860	1.088	threading_1	VPTRRRLVQLLT-SGEQTVNNLAAHFPASRSAISQHLRVLTEAGLVTPR-KDGRFRYYRLDPQGLAQLRALFDSFW-----IDELDRLVAD-------TE
2	SPARKS	3cuoa	0.158	0.760	1.149	threading_2	MSKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEG-LIDSQRDAQRILYSIKNEAVNA---IIATLKNVYC--------------------
3	HHPRED-l	2kko_A	0.141	0.850	1.179	threading_3	NGRRLQILDLLAQ-GERAVEAIATATGMNLTTASANLQALKSGGLVEAR-REGTRQYYRIAGEDVARLFALVQVVADEHLEHHHH--------HH-----
4	HHPRED-g	1r1t_A	0.156	0.770	1.165	threading_4	DPNRLRLLSLLAR-SELCVGDLAQAIGVSESAVSHQLRSLRNLRLVSYR-KQGRHVYYQLQDHHIVALYQNALDHLQEC---------------------
5	SAM-T99	1xmkA	0.221	0.680	1.086	threading_5	AEIKEKICDYLFNVSDSSALNLAKNIGLTARDINAVLIDMERQGDVYRQGTTPPI--WHLTDKKRERMQI------------------------------
6	MUSTER	2oqgA	0.202	0.890	1.057	threading_6	VGTRWEILTELGR-ADQSASSLATRLPVSRQAIAKHLNALQACGLVESV-KVGREIRYRALGAELNKTARTLERIGAEWDRRAAIKQIAES---------
7	SPARKS	3jtha	0.173	0.750	1.083	threading_7	KAANERRLQILCHNQELSVGELCAKLQLSQSALSQHLAWLRRDGLVTTR-KEAQTVYYTLKSEEVKA--------------IKLLHSLYC----------
8	HHPRED-l	1u2w_A	0.164	0.730	1.178	threading_8	DENRAKITYALCQDEELCVCDIANILGVTIANASHHLRTLYKQGVVNFR-----LALYSLGDEHIRQ-------IMMI---------ALAHKKK------
9	HHPRED-g	1qbj_A	0.222	0.540	1.026	threading_9	--QEQRILKFLEEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEAPLWKIA--------------------------------------------
10	MUSTER	1okrB	0.122	0.980	1.034	threading_10	TYAEWEVMNIIWMKKYASANNIIEEIQWSPKTIRTLITRLYKKGFIDRKKDNKIFQYYSLVEESDIKYKTSKNFINKVYKGG--FNSLVLNFVEKEDLSQ

Predicted Tertiary Structure


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TM-score=0.678 to 1ulyA SCOP code=a.4.5.58	TM-score=0.676 to 2p8tA SCOP code=a.4.5.72	TM-score=0.724 to 1r1uC SCOP code=a.4.5.5	TM-score=0.682 to 1r23A SCOP code=a.4.5.5	TM-score=0.729 to 1xmkA SCOP code=a.4.5.19