Template-based Modeling Results for RCNB_ECOLI

Submitted Primary Sequence

>Length 112
MTIKNKMLLGALLLVTSAAWAAPATAGSTNTSGISKYELSSFIADFKHFKPGDTVPEMYRTDEYNIKQWQLRNLPAPDAGTHWTYMGGAYVLISDTDGKIIKAYDGEIFYHR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTIKNKMLLGALLLVTSAAWAAPATAGSTNTSGISKYELSSFIADFKHFKPGDTVPEMYRTDEYNIKQWQLRNLPAPDAGTHWTYMGGAYVLISDTDGKIIKAYDGEIFYHR
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCHHCCCCCCCCCHHHCCCCCEECCHHHCCCCCCCCCCEEEEECCEEEEEECCCCEEEEEECCCEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTIKNKMLLGALLLVTSAAWAAPATAGSTNTSGISKYELSSFIADFKHFKPGDTVPEMYRTDEYNIKQWQLRNLPAPDAGTHWTYMGGAYVLISDTDGKIIKAYDGEIFYHR
5521111000000000000000212122232222232322211122320331220132122330102102222022132111001011000000113020010010201226
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTIKNKMLLGALLLVTSAAWAAPATAGSTNTSGISKYELSSFIADFKHFKPGDTVPEMYRTDEYNIKQWQLRNLPAPDAGTHWTYMGGAYVLISDTDGKIIKAYDGEIFYHR
1	MUSTER	2l1sA	0.723	0.741	3.894	threading_1	-----------------------------GAAGIDQYALKEFTADFTQFHIGDTVPAMYLTPEYNIKQWQQRNLPAPDAGSHWTYMGGNYVLITDTEGKILKVYDGEIFYHR
2	SPARKS	2l1sa	0.723	0.741	4.897	threading_2	-----------------------------GAAGIDQYALKEFTADFTQFHIGDTVPAMYLTPEYNIKQWQQRNLPAPDAGSHWTYMGGNYVLITDTEGKILKVYDGEIFYHR
3	PROSPECT2	2l1sA	0.723	0.741	1.741	threading_3	-----------------------------GAAGIDQYALKEFTADFTQFHIGDTVPAMYLTPEYNIKQWQQRNLPAPDAGSHWTYMGGNYVLITDTEGKILKVYDGEIFYHR
4	PPA-I	2l1sA	0.723	0.741	5.896	threading_4	-----------------------------GAAGIDQYALKEFTADFTQFHIGDTVPAMYLTPEYNIKQWQQRNLPAPDAGSHWTYMGGNYVLITDTEGKILKVYDGEIFYHR
5	HHPRED-l	2l1s_A	0.720	0.732	7.193	threading_5	-----------------------------GAAGIDQYALKEFTADFTQFHIGDTVPAMYLTPEYNIKQWQQRNLPAPDAGSHWTYMGGNYVLITDTEGKILKVYDGEIFYH-
6	HHPRED-g	2l1s_A	0.723	0.741	7.264	threading_6	-----------------------------GAAGIDQYALKEFTADFTQFHIGDTVPAMYLTPEYNIKQWQQRNLPAPDAGSHWTYMGGNYVLITDTEGKILKVYDGEIFYHR
7	SP3	2l1sa	0.723	0.741	1.978	threading_7	-----------------------------GAAGIDQYALKEFTADFTQFHIGDTVPAMYLTPEYNIKQWQQRNLPAPDAGSHWTYMGGNYVLITDTEGKILKVYDGEIFYHR
8	SAM-T99	2l1sA	0.732	0.732	4.677	threading_8	------------------------------AAGIDQYALKEFTADFTQFHIGDTVPAMYLTPEYNIKQWQQRNLPAPDAGSHWTYMGGNYVLITDTEGKILKVYDGEIFYHR
9	MUSTER	1pvtA1	0.169	0.795	0.771	threading_9	--GHRETIREIQKVAYWLAIKGLSEANAGNDERPEGYEVKSVN------EYG-----DYDGPEYLL-------ITATGSRREVYEDDSKICLLHVLPGKHYEILHGN---GK
10	SPARKS	2k5ha	0.070	0.768	0.797	threading_10	-------------------MGSSHHHHHHSSGRENLYFQGHMAARITGEPSKKAVSDRLIGRKGVVME------AISPQNSGLVKVDGETWRAVLDVGSVKAI-EGVKLVVE

Predicted Tertiary Structure


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TM-score=0.408 to 1wmiA SCOP code=d.298.1.2	TM-score=0.408 to 1wmiA SCOP code=d.298.1.2	TM-score=0.408 to 1wmiA SCOP code=d.298.1.2	TM-score=0.408 to 1wmiA SCOP code=d.298.1.2	TM-score=0.408 to 1wmiA SCOP code=d.298.1.2