Template-based Modeling Results for RBSD_ECOLI

Submitted Primary Sequence

>Length 139
MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSGECSPYANIILCAGVTF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSGECSPYANIILCAGVTF
CCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSGECSPYANIILCAGVTF
5542311113001000401120000001010101311220000123101200200010022120210000220333323113101210320143233312021020320231023010001012011000000020133
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSGECSPYANIILCAGVTF
1	MUSTER	3e7nD	0.860	0.978	2.898	threading_1	AKKGTVLNSEISSVISRLGHTDTLVVCDAGLPIPNSTARID-ALTQGVPSF-QVVDVVTREQ-VEAAILATEIKQQNPQLHETLLTHLEQLQQHQGNTIKISYTTHEQFKKLTADSQAVIRSGECSPYANVILCAGVTF
2	SPARKS	3dsaa	0.859	0.971	4.045	threading_2	AKKGTVLNSEISSVISRLGHTDTLVVCDAGLPIPNSTARID-ALTQGVPSF-QVVDVVT-REQVEAAILATEIKQQNPQLHETLLTHLEQLQQHQGNTIKISYTTHEQFKKLTADSQAVIRSGECSPYANVILCAGVT-
3	PROSPECT2	1ogcA	0.458	0.942	2.750	threading_3	MKKHGILNSHLAKILADLGHTDKIVIADAGLPVPDGVLKIDLSLKPGLPAFQDTAAVLAEEMAVEKVIAAAEIKASNQENAKFLENL--------FSEQEIEYLSHEEFKLLTKDAKAVIRTGEFTPYANCILQAGVLF
4	PPA-I	1ogcA	0.458	0.942	4.364	threading_4	MKKHGILNSHLAKILADLGHTDKIVIADAGLPVPDGVLKIDLSLKPGLPAFQDTAAVLAEEMAVEKVIAAAEIKASNQENAKFLENLF--------SEQEIEYLSHEEFKLLTKDAKAVIRTGEFTPYANCILQAGVLF
5	HHPRED-l	3dsa_A	0.873	0.964	5.233	threading_5	-KKGTVLNSEISSVISRLGHTDTLVVCDAGLPIPNSTARID-ALTQGVPSF-QVVDVVTRE-QVEAAILATEIKQQNPQLHETLLTHLEQLQQHQGNTIKISYTTHEQFKKLTADSQAVIRSGECSPYANVILCAGVT-
6	HHPRED-g	3dsa_A	0.873	0.964	4.388	threading_6	-KKGTVLNSEISSVISRLGHTDTLVVCDAGLPIPNSTARID-ALTQGVPSF-QVVDVVTRE-QVEAAILATEIKQQNPQLHETLLTHLEQLQQHQGNTIKISYTTHEQFKKLTADSQAVIRSGECSPYANVILCAGVT-
7	SP3	2wcvj	0.190	0.986	4.238	threading_7	MLKTPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIPLFELDSYAPPLVMMAAVE--GDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIVITGERAKYGNILLKKGVTP
8	SAM-T99	1ogcA	0.458	0.942	4.216	threading_8	MKKHGILNSHLAKILADLGHTDKIVIADAGLPVPDGVLKIDLSLKPGLPAFQDTAAVLAEEMAVEKVIAAAEIKASNQENAKFLENLF--------SEQEIEYLSHEEFKLLTKDAKAVIRTGEFTPYANCILQAGVLF
9	MUSTER	1ogcA	0.458	0.942	2.889	threading_9	MKKHGILNSHLAKILADLGHTDKIVIADAGLPVPDGVLKIDLSLKPGLPAFQDTAAVLAEEMAVEKVIAAAEIKASNQENAKFLENLF--------SEQEIEYLSHEEFKLLTKDAKAVIRTGEFTPYANCILQAGVLF
10	SPARKS	3e7na	0.859	0.971	4.009	threading_10	AKKGTVLNSEISSVISRLGHTDTLVVCDAGLPIPNSTARID-ALTQGVPSF-QVVDVVT-REQVEAAILATEIKQQNPQLHETLLTHLEQLQQHQGNTIKISYTTHEQFKKLTADSQAVIRSGECSPYANVILCAGVT-

Predicted Tertiary Structure


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TM-score=0.915 to 1ogcA SCOP code=c.133.1.1	TM-score=0.969 to 1ogcA SCOP code=c.133.1.1	TM-score=0.918 to 1ogcA SCOP code=c.133.1.1	TM-score=0.966 to 1ogcA SCOP code=c.133.1.1	TM-score=0.969 to 1ogcA SCOP code=c.133.1.1