Template-based Modeling Results for RBFA_ECOLI

Submitted Primary Sequence

>Length 133
MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVNPDDSKED
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVNPDDSKED
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVNPDDSKED
5543223122003201310020023303233122001001010152111020000012332330032003102300210011003103111001000011211210110130022025333344233443448
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVNPDDSKED
1	MUSTER	1kkgA	1.000	0.812	3.121	threading_1	MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMR-------------------------
2	SPARKS	1kkga	1.000	0.812	3.824	threading_2	MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMR-------------------------
3	PROSPECT2	2e7gA	0.174	0.910	2.013	threading_3	RKEDHARLRALNGLLYKALTDLLCTPEVSQELDLNVELSKVSLTPDFSACRAYWKTTLS--AEQNAHMEAVLQRSAAHMRHLLMSQQTLRNVPPIVFVQDKGNAALAELDQLL----------AVADSGPSSG
4	PPA-I	1kkgA	1.000	0.812	4.715	threading_4	MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMR-------------------------
5	HHPRED-l	1jos_A	0.710	0.752	6.085	threading_5	------RSDRVAQEIQKEIAVILQREVKDPRIG-MVTVSDVEVSSDLSYAKIFVTFLFDHDEMAIEQGMKGLEKASPYIRSLLGKAMRLRIVPEIRFIYDQSLVEGM--------------------------
6	HHPRED-g	1jos_A	0.710	0.752	5.355	threading_6	------RSDRVAQEIQKEIAVILQREVKDPRIGMV-TVSDVEVSSDLSYAKIFVTFLFDHDEMAIEQGMKGLEKASPYIRSLLGKAMRLRIVPEIRFIYDQSLVEGM--------------------------
7	SP3	1kkga	1.000	0.812	4.119	threading_7	MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMR-------------------------
8	SAM-T99	1kkgA	1.000	0.812	5.682	threading_8	MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMR-------------------------
9	MUSTER	2kzfA	0.359	0.774	2.822	threading_9	MNP-AYRKAMLESEIQKLLMEALQQ--RDPRLKKFVTFSRVELSKDKRYADVYVSFLGT--PEERKETVEILNRAKGFFRTFIAKNLRLYVAPEIRFYEDKGIEASVK-------------------------
10	SPARKS	2kzfa	0.356	0.782	3.768	threading_10	MNPAY-RKAMLESEIQKLLMEALQ-QLRDPRLKDFVTFSRVELSKDKRYADVYVSFLGT--PEERKETVEILNRAKGFFRTFIAKNLRLYVAPEIRFYEDKGIEASVK-------------------------

Predicted Tertiary Structure


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TM-score=0.903 to 1kkgA SCOP code=d.52.7.1	TM-score=0.902 to 1kkgA SCOP code=d.52.7.1	TM-score=0.902 to 1kkgA SCOP code=d.52.7.1	TM-score=0.806 to 2e7gA SCOP code=d.52.7.1	TM-score=0.903 to 1kkgA SCOP code=d.52.7.1