Template-based Modeling Results for PTHP_ECOLI

Submitted Primary Sequence

>Length 85
MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASAKSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASAKSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE
CCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCEEEECCCHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASAKSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE
4311202020331010200010031042020201011322201031011011010331220100020321320021013112324
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASAKSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE
1	MUSTER	1opdA	0.976	1.000	3.780	threading_1	MFEQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASAKDLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE
2	SPARKS	1opd_	0.976	1.000	3.753	threading_2	MFEQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASAKDLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE
3	PROSPECT2	1opd_	0.976	1.000	1.996	threading_3	MFEQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASAKDLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE
4	PPA-I	1opdA	0.976	1.000	4.751	threading_4	MFEQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASAKDLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE
5	HHPRED-l	3ccd_A	0.976	0.988	4.313	threading_5	MFEQEVTITAPNGLDTRPAAQFVKEAKGFTSEITVTSNGKSASAKSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAEL-
6	HHPRED-g	3ccd_A	0.976	1.000	3.508	threading_6	MFEQEVTITAPNGLDTRPAAQFVKEAKGFTSEITVTSNGKSASAKSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE
7	SP3	1opd_	0.976	1.000	3.669	threading_7	MFEQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASAKDLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE
8	SAM-T99	3le1A	0.424	1.000	4.201	threading_8	MKEVTIEIKNKTGLHARPAALFVQTASKFSSQIWVEKDNKKVNAKSIMGIMSLGVSQGNVVKLSAEGDDEEEAIKALVDLIESKF
9	MUSTER	3le1A	0.440	0.988	3.657	threading_9	MKEVTIEIKNKTGLHARPAALFVQTASKFSSQIWVEKDNKKVNAKSIMGIMSLGVSQGNVVKLSAEGDDEEEAIKALVDLIES-E
10	SPARKS	1ptf_	0.353	1.000	3.624	threading_10	MEKKEFHIVAETGIHARPATLLVQTASKFNSDINLEYKGKSVNLKSIMGVMSLGVGQGSDVTITVDGADEAEGMAAIVETLQKEG

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.998 to 1opdA TM-score=0.986 to native SCOP code=d.94.1.1	TM-score=0.998 to 1opdA TM-score=0.986 to native SCOP code=d.94.1.1	TM-score=0.998 to 1opdA TM-score=0.986 to native SCOP code=d.94.1.1	TM-score=0.998 to 1opdA TM-score=0.986 to native SCOP code=d.94.1.1	TM-score=0.998 to 1opdA TM-score=0.986 to native SCOP code=d.94.1.1

Experimental Structure

Download 1pohA

SCOP code=d.94.1.1