Template-based Modeling Results for PMRD_ECOLI


  Submitted Primary Sequence

>Length 88
MEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGDLLSPLQNALYCINREKLHTVKVLSASSYSPDEWERQCKVAGKTQ
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--------10--------20--------30--------40--------50--------60--------70--------80
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGDLLSPLQNALYCINREKLHTVKVLSASSYSPDEWERQCKVAGKTQ
CCEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGDLLSPLQNALYCINREKLHTVKVLSASSYSPDEWERQCKVAGKTQ
4311012000134332100000111100200020222121321221010220110023342210100103111031023104223334
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--------10--------20--------30--------40--------50--------60--------70--------80
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGDLLSPLQNALYCINREKLHTVKVLSASSYSPDEWERQCKVAGKTQ
1MUSTER2jsoA1.0001.0003.897threading_1MEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGDLLSPLQNALYCINREKLHTVKVLSASSYSPDEWERQCKVAGKTQ
2SPARKS2jsoa1.0001.0004.556threading_2MEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGDLLSPLQNALYCINREKLHTVKVLSASSYSPDEWERQCKVAGKTQ
3PROSPECT22jsoA1.0001.0001.480threading_3MEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGDLLSPLQNALYCINREKLHTVKVLSASSYSPDEWERQCKVAGKTQ
4PPA-I2jsoA1.0001.0005.070threading_4MEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGDLLSPLQNALYCINREKLHTVKVLSASSYSPDEWERQCKVAGKTQ
5HHPRED-l2jso_A1.0000.9898.636threading_5MEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGDLLSPLQNALYCINREKLHTVKVLSASSYSPDEWERQCKVAGKT-
6HHPRED-g2jso_A1.0001.0007.026threading_6MEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGDLLSPLQNALYCINREKLHTVKVLSASSYSPDEWERQCKVAGKTQ
7SP32jsoa1.0001.0004.548threading_7MEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGDLLSPLQNALYCINREKLHTVKVLSASSYSPDEWERQCKVAGKTQ
8SAM-T992jsoA1.0001.0006.565threading_8MEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGDLLSPLQNALYCINREKLHTVKVLSASSYSPDEWERQCKVAGKTQ
9MUSTER2rqxA0.3750.9093.283threading_9MEWWVKKVQDNASASLCRVVLQ--SGALEMIAEIEARLRLREGDKLTPLADARYCLNNNPTQTLKIRNATHYSSERWTNADK------
10SPARKS2rqxa0.3750.9093.700threading_10MEWWVKKVQDNASASLCRVVLQ--SGALEMIAEIEARLRLREGDKLTPLADARYCLNNNPTQTLKIRNATHYSSERWTNADK------

  Predicted Tertiary Structure

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TM-score=0.529 to 1l1cA
SCOP code=b.35.2.1
TM-score=0.529 to 1l1cA
SCOP code=b.35.2.1
TM-score=0.529 to 1l1cA
SCOP code=b.35.2.1
TM-score=0.529 to 1l1cA
SCOP code=b.35.2.1
TM-score=0.529 to 1l1cA
SCOP code=b.35.2.1