Template-based Modeling Results for PAAI_ECOLI


  Submitted Primary Sequence

>Length 140
MSHKAWQNAHAMYENDACAKALGIDIISMDEGFAVVTMTVTAQMLNGHQSCHGGQLFSLADTAFAYACNSQGLAAVASACTIDFLRPGFAGDTLTATAQVRHQGKQTGVYDIEIVNQQQKTVALFRGKSHRIGGTITGEA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSHKAWQNAHAMYENDACAKALGIDIISMDEGFAVVTMTVTAQMLNGHQSCHGGQLFSLADTAFAYACNSQGLAAVASACTIDFLRPGFAGDTLTATAQVRHQGKQTGVYDIEIVNQQQKTVALFRGKSHRIGGTITGEA
CCHHHHHHHHHHHCCCHHHHHCCCEEEEEECCEEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEECCCCEEEEEEEEECCCCCEEEEEEEEEEEECCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSHKAWQNAHAMYENDACAKALGIDIISMDEGFAVVTMTVTAQMLNGHQSCHGGQLFSLADTAFAYACNSQGLAAVASACTIDFLRPGFAGDTLTATAQVRHQGKQTGVYDIEIVNQQQKTVALFRGKSHRIGGTITGEA
45330121023113211003101010110231101010201230011120000000000010000000112221000010000001102322100010101231420000101012444200010100001022323368
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSHKAWQNAHAMYENDACAKALGIDIISMDEGFAVVTMTVTAQMLNGHQSCHGGQLFSLADTAFAYACNSQGLAAVASACTIDFLRPGFAGDTLTATAQVRHQGKQTGVYDIEIVNQQQKTVALFRGKSHRIGGTITGEA
1MUSTER2fs2B0.8950.9503.618threading_1LSHKAWQNAHAY-ENDACAKALGIDIISDE---GFAVVTTVTAQLNGHQSCHGGQLFSLADTAFAYACNSQGLAAVASACTIDFLRPGFAGDTLTATAQVRHQGKQTGVYDIEIVNQQQKTVALFRGKSHRIGGTIT---
2SPARKS3lbba0.2820.8863.584threading_2------------NHLHEIRVFENFDMVSFEKGHVIVTTEVVDKSLNYYGFAHGGYIFTLCDQISGLVSISTGFDAVTLQSSINYLKSGKLGDTLLIDGRCVHDGRTTKVVDVTVTNQLKQEVAKATFTMFVTGKRK----
3PROSPECT23lbbA0.2820.8862.574threading_3NH------------LHEIRVFENFDMVSFEKGHVIVTTEVVDKSLNYYGFAHGGYIFTLCDQISGLVSISTGFDAVTLQSSINYLKSGKLGDTLLIDGRCVHDGRTTKVVDVTVTNQLKQEVAKATFTMFVTG----KRK
4PPA-I2fs2B0.8210.9574.365threading_4SLSHKAWQNAHAYENDACAKALGIDIISDEG---FAVVTTVTAQLNGHQSCHGGQLFSLADTAFAYACNSQGLAAVASACTIDFLRPGFAGDTLTATAQVRHQGKQTGVYDIEIVNQQQKTVALFRGKSHRIGGTIT---
5HHPRED-l2fs2_A0.9920.9073.072threading_5LSHKAWQNAHA-YENDACAKALGIDIIS-DEGFAVVT-TVTAQ-LNGHQSCHGGQLFSLADTAFAYACNSQGLAAVASACTIDFLRPGFAGDTLTATAQVRHQGKQTGVYDIEIVNQQQKTVALFRGKSHR---------
6HHPRED-g2fs2_A0.9920.9072.538threading_6LSHKAWQNAHA-YENDACAKALGIDIIS-DEGFAVVT-TVTAQ-LNGHQSCHGGQLFSLADTAFAYACNSQGLAAVASACTIDFLRPGFAGDTLTATAQVRHQGKQTGVYDIEIVNQQQKTVALFRGKSHR---------
7SP33lbba0.2820.8863.418threading_7------------NHLHEIRVFENFDMVSFEKGHVIVTTEVVDKSLNYYGFAHGGYIFTLCDQISGLVSISTGFDAVTLQSSINYLKSGKLGDTLLIDGRCVHDGRTTKVVDVTVTNQLKQEVAKATFTMFVTGKRK----
8SAM-T992fs2B0.8310.9293.052threading_8SLSHKAWQNAHAYENDACAKALGIDIISDEGFAVVTTVT---AQLNGHQSCHGGQLFSLADTAFAYACNSQGLAAVASACTIDFLRPGFAGDTLTATAQVRHQGKQTGVYDIEIVNQQQKTVALFRGKSHRIG-------
9MUSTER3lbbA0.2850.8793.414threading_9-------------NHHEIRVFENFDMVSFEKGHVIVTTEVVDKSLNYYGFAHGGYIFTLCDQISGLVSISTGFDAVTLQSSINYLKSGKLGDTLLIDGRCVHDGRTTKVVDVTVTNQLKQEVAKATFTMFVTGKRK----
10SPARKS3s4ka0.1830.8573.421threading_10---------------VPFDSELGLQFTELGPDGARAQLDVRPKLLQLTGVVHGGVYCAMIESIASMAAFAEGGSVVGVNNNTDFVRSISSG-MVYGTAEPLHRGRRQQLWLVTITDDTDRVVARGQVRLQNLEARP----

  Predicted Tertiary Structure

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TM-score=0.951 to 2fs2B
TM-score=0.978 to native
SCOP code=d.38.1.5
TM-score=0.952 to 2fs2B
TM-score=0.979 to native
SCOP code=d.38.1.5
TM-score=0.812 to 1wlvA
TM-score=0.799 to native
SCOP code=d.38.1.5
TM-score=0.812 to 1wlvA
TM-score=0.801 to native
SCOP code=d.38.1.5
TM-score=0.959 to 2fs2B
TM-score=0.978 to native
SCOP code=d.38.1.5

  Experimental Structure

Download 1psuB
SCOP code=d.38.1.5