Template-based Modeling Results for NUOA_ECOLI

Submitted Primary Sequence

>Length 147
MSMSTSTEVIAHHWAFAIFLIVAIGLCCLMLVGGWFLGGRARARSKNVPFESGIDSVGSARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVEAAIFIFVLLAGLVYLVRIGALDWTPARSRRERMNPETNSIANRQR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSMSTSTEVIAHHWAFAIFLIVAIGLCCLMLVGGWFLGGRARARSKNVPFESGIDSVGSARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVEAAIFIFVLLAGLVYLVRIGALDWTPARSRRERMNPETNSIANRQR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSMSTSTEVIAHHWAFAIFLIVAIGLCCLMLVGGWFLGGRARARSKNVPFESGIDSVGSARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVEAAIFIFVLLAGLVYLVRIGALDWTPARSRRERMNPETNSIANRQR
541220121001000000000000000000000010002324242321101011101210203110100000000000001000000000113311110000000000000000010031311311323233342333232223438
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSMSTSTEVIAHHWAFAIFLIVAIGLCCLMLVGGWFLGGRARARSKNVPFESGIDSVGSARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVEAAIFIFVLLAGLVYLVRIGALDWTPARSRRERMNPETNSIANRQR
1	MUSTER	3rkoA	0.947	0.646	2.616	threading_1	--------------AFAIFLIVAIGLCCLMLVGGWFL-----------------GGRARARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVEAAIFIFVLLAGLVYLVRIGALDWT---------------------
2	SPARKS	3rkoa	0.947	0.646	3.180	threading_2	--------------AFAIFLIVAIGLCCLMLVGGWFL-----------------GGRARARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVEAAIFIFVLLAGLVYLVRIGALDWT---------------------
3	PROSPECT2	3rkoA	0.726	0.646	1.616	threading_3	AF---------------AIFLIVAIGLCCLMLVGGW----------------FLGGRARARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVEAAIFIFVLLAGLVYLVRIGALDWT---------------------
4	PPA-I	3rkoA	0.958	0.646	4.350	threading_4	--------------AFAIFLIVAIGLCCLMLVGGWFLG-----------------GRARARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVEAAIFIFVLLAGLVYLVRIGALDWT---------------------
5	HHPRED-l	3rko_A	1.000	0.646	9.468	threading_5	--------------AFAIFLIVAIGLCCLMLVGGWFLGGRARAR-----------------LRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVEAAIFIFVLLAGLVYLVRIGALDWT---------------------
6	HHPRED-g	3rko_A	1.000	0.646	9.694	threading_6	--------------AFAIFLIVAIGLCCLMLVGGWFLGGRARAR-----------------LRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVEAAIFIFVLLAGLVYLVRIGALDWT---------------------
7	SP3	3rkoa	0.947	0.646	1.274	threading_7	--------------AFAIFLIVAIGLCCLMLVGGWFL-----------------GGRARARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVEAAIFIFVLLAGLVYLVRIGALDWT---------------------
8	SAM-T99	3rkoA	1.000	0.646	6.279	threading_8	--------------AFAIFLIVAIGLCCLMLVGGWFLGGRAR-----------------ARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVEAAIFIFVLLAGLVYLVRIGALDWT---------------------
9	MUSTER	3b5xA4	0.120	0.850	0.823	threading_9	VRFESTGGLLSRYDSEQVAGATSRALVSIV-----------REGASII-GLLTLMFWNSWQL--SSIADPVIQMIASLALFAVLFLASVDSIRAELFTVVFSAMFGLMRPLKALTSVTSE--FQRGMAAC--QTLF----GLMDLET
10	SPARKS	1jkva	0.131	0.986	0.714	threading_10	LLLDTGTEEMAHVEMISTMIGYGPEDLKRDPSLATTMAGMDPEHSLVHG--LNASLNNPNGAAWNAGYVLVADMRFNVVRESEARLQVSRLYSMTEMLKFLLARETQHQLQFMKAQEELEEKYGIIVPGDMKEIEHSESHVLMNFSD

Predicted Tertiary Structure


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TM-score=0.519 to 1pd3A SCOP code=a.30.3.1	TM-score=0.519 to 1pd3A SCOP code=a.30.3.1	TM-score=0.500 to 1pd3A SCOP code=a.30.3.1	TM-score=0.514 to 1pd3A SCOP code=a.30.3.1	TM-score=0.524 to 1pd3A SCOP code=a.30.3.1