Submitted Primary Sequence |
>Length 149 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED 12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789 --------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140 |
Predicted Secondary Structure |
>C-coil;H-helix;E-sheet MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED CCCCCCCCCCCEEEECCCCCCCCEEEECHHCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHC 12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789 --------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140 |
Predicted Solvent Accessibility |
>0-buried to 9-exposed MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED 45012022231200102212322101112302213320212220110102002323232212131011000301242202231022002201220342233302032002001210341231000100100320220320031024135 12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789 --------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140 |
Top 10 Templates |
Rank | Method | Template | Identity | Coverage | N-Zscore | Threading Alignment | MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED |
1 | PPA-I | 7r1rA1 | 0.161 | 0.584 | 1.036 | threading_1 | --------------------------------------------MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVS------ISQVELRSHIQFYDGIKTSDIHETIIKAAADLISAIFHLRKKAYGQFEPP------------ |
2 | HHPRED-l | 2xap_A | 0.149 | 0.631 | 1.621 | threading_2 | -----------------------------------------------NLLVTKRDGSTERINLDKIHRVLDWAAEGLH--NVSISQVELRSHIQ----FYDGIKTSDIHETIIKAAISRDAPDYQYLAALRKKFEP-PALYDHVVKMV- |
3 | HHPRED-g | 3hnc_A | 0.106 | 0.570 | 1.194 | threading_3 | -------------------------------------------------------------MFDKITSRIQKLCYGLNVDPAQITMKVIQAETAATLTTKHPDYAILAARIAVSNLHKET---KKVFSDVMEDLYSVLANKDRLNSAII |
4 | HHPRED-l | 3hnc_A | 0.145 | 0.557 | 1.615 | threading_4 | -------------------------------------------------------------MFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGL----YSGVTTVELDTLAAETAATTKHPDYAILAAISNLHKETKVFSDVMEDLY- |
5 | HHPRED-g | 2xap_A | 0.200 | 0.638 | 1.193 | threading_5 | -----------------------------------------------NLLVTKRDGSTERINLDKIHRVLDWAAEGLNVSISQV-------ELRSHIQFYDGIKTSDIHETIIKAAISRDAPDYQYLAAAYGQFEALYEEFKQMDTFID |
6 | HHPRED-l | 3k8t_A | 0.231 | 0.087 | 1.614 | threading_6 | -------------------------------------------------------------------------------------------------------------------------------------TT--KQFSKVVEDLY- |
7 | HHPRED-g | 3k8t_A | 0.125 | 0.161 | 1.192 | threading_7 | -----------------------------------------------------------------------------------------------------------------------------QFSKVVEDLYDVYNIKDKLNSAIV |
8 | HHPRED-l | 1qyp_A | 0.225 | 0.268 | 1.073 | threading_8 | ITCPKCGNDTAYWMQTRAGDEPSTIF--YKCTKCGHTWRSYE----------------------------------------------------------------------------------------------------------- |
9 | HHPRED-g | 1qyp_A | 0.225 | 0.268 | 1.087 | threading_9 | ITCPKCGNDTAYWMQTRAGDEPSTIF--YKCTKCGHTWRSYE----------------------------------------------------------------------------------------------------------- |
10 | MUSTER | 7r1rA1 | 0.186 | 0.577 | 0.785 | threading_10 | --------------------------------------------MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGHNVS-------ISQVELRSHIQFYDGIKTSDIHETIIKAAADLDAPDYLAIFHLRKQFEPP------------ |
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