Template-based Modeling Results for NIRD_ECOLI

Submitted Primary Sequence

>Length 108
MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISNIDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDGVVQLRG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISNIDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDGVVQLRG
CCCCEEEEEHHHCCCCCEEEEEECCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEECCCCCEEEECCCCCCEEECCCCCCCCCCCCCEEEEEEEEECCEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISNIDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDGVVQLRG
443101002132033320100202321000010133220000001010231010030012223220000010230102022020233432202002021331101033
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISNIDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDGVVQLRG
1	MUSTER	2jo6A	1.000	1.000	4.118	threading_1	MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISNIDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDGVVQLRG
2	SPARKS	2jo6a	1.000	1.000	4.507	threading_2	MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISNIDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDGVVQLRG
3	PROSPECT2	2jo6A	0.991	1.000	2.176	threading_3	MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISNIDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDGVVQLRS
4	PPA-I	2jo6A	1.000	1.000	5.605	threading_4	MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISNIDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDGVVQLRG
5	HHPRED-l	2jo6_A	1.000	0.991	3.493	threading_5	MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISNIDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDGVVQLR-
6	HHPRED-g	2jo6_A	1.000	1.000	3.417	threading_6	MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISNIDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDGVVQLRG
7	SP3	2jo6a	1.000	1.000	4.434	threading_7	MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISNIDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDGVVQLRG
8	SAM-T99	2jo6A	1.000	0.981	4.406	threading_8	MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISNIDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDGVVQL--
9	MUSTER	3c0dA	0.350	0.954	3.519	threading_9	LT-KVKLCQLDDL-PFIGATVLIEGERVALFYIP-DSGVYAVQDWDPIGKA-YVSRGIVGDING-ECVASPLYKQHFSLKSGQCLEDEAHCLKTWRVTVDDNQVCYLA
10	SPARKS	2jzaa	0.620	1.000	4.256	threading_10	MSQWTTVCKLDDILPGTGVCALVEQQQIAVFRPRNDEQVYAISNIDPFAQASVLSRGIVAEHQDDLWVASPLKKQHFRLYDGFCLEDGAYSVAAYDTQVTNGNVQISI

Predicted Tertiary Structure


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TM-score=0.989 to 2jo6A SCOP code=b.33.1.3	TM-score=0.989 to 2jo6A SCOP code=b.33.1.3	TM-score=0.989 to 2jo6A SCOP code=b.33.1.3	TM-score=0.986 to 2jo6A SCOP code=b.33.1.3	TM-score=0.989 to 2jo6A SCOP code=b.33.1.3