Template-based Modeling Results for NIKR_ECOLI

Submitted Primary Sequence

>Length 133
MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHLQCLPKED
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHLQCLPKED
CEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCEEEEEEEEECCCCCEEEEEEEEECHHHHHHHHHHHHCCCCEEEEEEEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHLQCLPKED
3110101023300310120044221321020012002200232223332220000000002233230112002002313200000000004431001000020322102200220132310210101002347
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHLQCLPKED
1	MUSTER	2hzvA	1.000	0.970	3.732	threading_1	-QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGD-GDVQHFADDVIAQRGVRHGHLQCLPK--
2	SPARKS	2bj1a	0.315	0.977	4.905	threading_2	LIRFSISIPSKLLEKFDQIIEEIGYENRSEAIRDLIRDFIIRHEWEVGNEEVAGTITIVYNHDEGDVVKALLDLQHEYLDEIISSLHVHMDEHNCLEVIVVKGEAKKIKMIADKLLSLKGVKHGKLVMTS---
3	PROSPECT2	2ca9A	0.295	0.970	2.563	threading_3	IIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKL----VNPNDESKIAVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGNSFEIQRLQLEIGGLRGVKFAKLTKASSFE
4	PPA-I	2hzvA	1.000	0.970	6.425	threading_4	-QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGD-GDVQHFADDVIAQRGVRHGHLQCLPK--
5	HHPRED-l	2hza_A	1.000	0.970	7.055	threading_5	-QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGD-GDVQHFADDVIAQRGVRHGHLQCLPK--
6	HHPRED-g	2hza_A	1.000	0.970	5.643	threading_6	-QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGD-GDVQHFADDVIAQRGVRHGHLQCLPK--
7	SP3	2bj1a	0.315	0.977	4.677	threading_7	LIRFSISIPSKLLEKFDQIIEEIGYENRSEAIRDLIRDFIIRHEWEVGNEEVAGTITIVYNHDEGDVVKALLDLQHEYLDEIISSLHVHMDEHNCLEVIVVKGEAKKIKMIADKLLSLKGVKHGKLVMTS---
8	SAM-T99	2bj3C	0.320	0.962	6.184	threading_8	LIRFSISIPSKLLEKFDQIIEEIGYENRSEAIRDLIRDFIIRHEWEVGNEEVAGTITIVYNHDEGDVVKALLDLQHEYLDEIISSLHVHMDEHNCLEVIVVKGEAKKIKMIADKLLSLKGVKHGKLVM-----
9	MUSTER	2bj3C	0.308	1.000	3.611	threading_9	LIRFSISIPSKLLEKFDQIIEEIGYENRSEAIRDLIRDFIIRHEWEVGNEEVAGTITIVYNHDEGDVVKALLDLQHEYLDEIISSLHVHMDEHNCLEVIVVKGEAKKIKMIADKLLSLKGVKHGKLVMTSTGK
10	SPARKS	2ca9a	0.295	0.970	4.750	threading_10	IIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVNPN----DESKIAVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGNSFEIQRLQLEIGGLRGVKFAKLTKASSFE

Predicted Tertiary Structure


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TM-score=0.866 to 2hzvA TM-score=0.677 to native SCOP code=a.43.1.3	TM-score=0.535 to 1nzyB TM-score=0.240 to native SCOP code=c.14.1.3	TM-score=0.724 to 2bj3C TM-score=0.783 to native SCOP code=a.43.1.3	TM-score=0.679 to 2f1fA TM-score=0.599 to native SCOP code=d.58.18.6	TM-score=0.866 to 2hzvA TM-score=0.677 to native SCOP code=a.43.1.3

Experimental Structure

Download 3od2A

SCOP code=a.43.1.3