Template-based Modeling Results for NAPD_ECOLI


  Submitted Primary Sequence

>Length 87
MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEETP
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--------10--------20--------30--------40--------50--------60--------70--------80
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEETP
CCCCEEEEEEEEEECHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEETP
554211000000102231022002102203101000112420100000113313100200210330300000000011233334439
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--------10--------20--------30--------40--------50--------60--------70--------80
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEETP
1MUSTER2jsxA1.0001.0003.613threading_1MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEETP
2SPARKS2jsxa1.0001.0003.731threading_2MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEETP
3PROSPECT22jsxA1.0001.0001.727threading_3MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEETP
4PPA-I2jsxA1.0001.0005.978threading_4MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEETP
5HHPRED-l2jsx_A1.0000.9897.374threading_5MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEET-
6HHPRED-g2jsx_A1.0001.0005.695threading_6MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEETP
7SP32jsxa1.0001.0003.841threading_7MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEETP
8SAM-T992jsxA1.0001.0004.060threading_8MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEETP
9MUSTER2cviA0.1950.9431.714threading_9M----VTAFILMVTAAGKEREVMEKLLAMPEVKEAYVVYGEYDLIVKVETDTLKDLDQFITEIRKMPEIQMTSTMIA-ILEHHHHHH
10SPARKS2pq4a1.0001.0003.590threading_10MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEETP

  Predicted Tertiary Structure

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TM-score=0.667 to 1i1gA
SCOP code=a.4.5.32
TM-score=0.667 to 1i1gA
SCOP code=a.4.5.32
TM-score=0.667 to 1i1gA
SCOP code=a.4.5.32
TM-score=0.667 to 1i1gA
SCOP code=a.4.5.32
TM-score=0.667 to 1i1gA
SCOP code=a.4.5.32