Template-based Modeling Results for MINE_ECOLI

Submitted Primary Sequence

>Length 88
MALLDFFLSRKKNTANIAKERLQIIVAERRRSDAEPHYLPQLRKDILEVICKYVQIDPEMVTVQLEQKDGDISILELNVTLPEAEELK
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--------10--------20--------30--------40--------50--------60--------70--------80

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MALLDFFLSRKKNTANIAKERLQIIVAERRRSDAEPHYLPQLRKDILEVICKYVQIDPEMVTVQLEQKDGDISILELNVTLPEAEELK
CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEECHHHEEEEEEECCCCEEEEEEEEECCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MALLDFFLSRKKNTANIAKERLQIIVAERRRSDAEPHYLPQLRKDILEVICKYVQIDPEMVTVQLEQKDGDISILELNVTLPEAEELK
4311211123333223102310110002234230223003301310020013002024310101022333301001000202325439
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MALLDFFLSRKKNTANIAKERLQIIVAERRRSDAEPHYLPQLRKDILEVICKYVQIDPEMVTVQLEQKDGDISILELNVTLPEAEELK
1	MUSTER	2kxoA	0.402	0.989	3.334	threading_1	MSLIELLFGRKQKTATVARDRLQIIIAQERAQEGTPDYLPTLRKALMEVLSKYVNVSLDNIRISQEK-QDGMDVLELNITLPEQKKVL
2	SPARKS	2kxoa	0.402	0.989	3.373	threading_2	MSLIELLFGRKQKTATVARDRLQIIIAQERAQEQTPDYLPTLRKALMEVLSKYVNVSLDNIRISQEK-QDGMDVLELNITLPEQKKVL
3	PROSPECT2	2kxoA	0.414	0.989	1.377	threading_3	MSLIELLFGRKQKTATVARDRLQIIIAQERAQEQTPDYLPTLRKALMEVLSKYVNVSLDNIRISQEKQD-GMDVLELNITLPEQKKVE
4	PPA-I	2kxoA	0.402	0.989	5.724	threading_4	MSLIELLFGRKQKTATVARDRLQIIIAQERAQEQTPDYLPTLRKALMEVLSKYVNVSLDNIRISQEK-QDGMDVLELNITLPEQKKVL
5	HHPRED-l	2kxo_A	0.407	0.977	6.423	threading_5	MSLIELLFGRKQKTATVARDRLQIIIAQERAQEQTPDYLPTLRKALMEVLSKYVNVSLDNIRISQEK-QDGMDVLELNITLPEQKKV-
6	HHPRED-g	2kxo_A	0.402	0.989	5.402	threading_6	MSLIELLFGRKQKTATVARDRLQIIIAQERAQEQTPDYLPTLRKALMEVLSKYVNVSLDNIRISQEKQ-DGMDVLELNITLPEQKKVL
7	SP3	2kxoa	0.402	0.989	3.542	threading_7	MSLIELLFGRKQKTATVARDRLQIIIAQERAQEQTPDYLPTLRKALMEVLSKYVNVSLDNIRISQEK-QDGMDVLELNITLPEQKKVL
8	SAM-T99	2kxoA	0.429	0.955	3.712	threading_8	MSLIELLFGRKQKTATVARDRLQIIIAQERAQEQTPDYLPTLRKALMEVLSKYVNVSLDNIRISQE-KQDGMDVLELNITLPEQK---
9	MUSTER	1ev0A	1.000	0.659	2.085	threading_9	------------------------------RSDAEPHYLPQLRKDILEVICKYVQIDPEMVTVQLEQKDGDISILELNVTLPEAEELK
10	SPARKS	3ku7a	0.295	0.693	1.927	threading_10	--------------AATATDRLKLILAKERTLNLP--YMEEMRKEIIAVIQKYTKSS----DIHFK-TLQSVETIEVEIILP------

Predicted Tertiary Structure


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TM-score=0.505 to 1ev0A TM-score=0.437 to native SCOP code=d.71.1.1	TM-score=0.529 to 1ev0A TM-score=0.452 to native SCOP code=d.71.1.1	TM-score=0.510 to 3bzmA TM-score=0.439 to native SCOP code=d.161.1.1	TM-score=0.505 to 1vr6A TM-score=0.436 to native SCOP code=c.1.10.4	TM-score=0.510 to 3bzmA TM-score=0.439 to native SCOP code=d.161.1.1

Experimental Structure

Download 3r9jC

SCOP code=d.71.1.1