Template-based Modeling Results for LSRG_ECOLI


  Submitted Primary Sequence

>Length 96
MHVTLVEINVHEDKVDEFIEVFRQNHLGSVQEEGNLRFDVLQDPEVNSRFYIYEAYKDEDAVAFHKTTPHYKTCVAKLESLMTGPRKKRLFNGLMP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MHVTLVEINVHEDKVDEFIEVFRQNHLGSVQEEGNLRFDVLQDPEVNSRFYIYEAYKDEDAVAFHKTTPHYKTCVAKLESLMTGPRKKRLFNGLMP
CEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MHVTLVEINVHEDKVDEFIEVFRQNHLGSVQEEGNLRFDVLQDPEVNSRFYIYEAYKDEDAVAFHKTTPHYKTCVAKLESLMTGPRKKRLFNGLMP
201000102023311320030023102101423100100001134221100001002123001313203102200220130031212121022225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMHVTLVEINVHEDKVDEFIEVFRQNHLGSVQEEGNLRFDVLQDPEVNSRFYIYEAYKDEDAVAFHKTTPHYKTCVAKLESLMTGPRKKRLFNGLMP
1MUSTER3qmqC1.0001.0003.994threading_1MHVTLVEINVHEDKVDEFIEVFRQNHLGSVQEEGNLRFDVLQDPEVNSRFYIYEAYKDEDAVAFHKTTPHYKTCVAKLESLMTGPRKKRLFNGLMP
2SPARKS3qmqa1.0001.0003.666threading_2MHVTLVEINVHEDKVDEFIEVFRQNHLGSVQEEGNLRFDVLQDPEVNSRFYIYEAYKDEDAVAFHKTTPHYKTCVAKLESLMTGPRKKRLFNGLMP
3PROSPECT23qmqC1.0001.0002.051threading_3MHVTLVEINVHEDKVDEFIEVFRQNHLGSVQEEGNLRFDVLQDPEVNSRFYIYEAYKDEDAVAFHKTTPHYKTCVAKLESLMTGPRKKRLFNGLMP
4PPA-I3qmqC1.0001.0005.474threading_4MHVTLVEINVHEDKVDEFIEVFRQNHLGSVQEEGNLRFDVLQDPEVNSRFYIYEAYKDEDAVAFHKTTPHYKTCVAKLESLMTGPRKKRLFNGLMP
5HHPRED-l2gff_A0.7390.9583.193threading_5-HVTLVEINVKEDKVDQFIEVFRANHLGSIREAGNLRFDVLRDEHIPTRFYIYEAYTDEAAVAIHKTTPHYLQCVEQLAPL-TGPRKKTVFIGL--
6HHPRED-g2omo_A0.4350.9582.560threading_6-YVTIVYASVKTDKTEAFKEATR-NHEQSIREPGN-RFDILQSADDPTRFVLYEAYKTRKDAAAHKETAHYLTWRDTVADW-AEPRKGVIYGGLYP
7SP33qmqa1.0001.0003.755threading_7MHVTLVEINVHEDKVDEFIEVFRQNHLGSVQEEGNLRFDVLQDPEVNSRFYIYEAYKDEDAVAFHKTTPHYKTCVAKLESLMTGPRKKRLFNGLMP
8SAM-T993qmqC1.0001.0003.430threading_8MHVTLVEINVHEDKVDEFIEVFRQNHLGSVQEEGNLRFDVLQDPEVNSRFYIYEAYKDEDAVAFHKTTPHYKTCVAKLESLMTGPRKKRLFNGLMP
9MUSTER2gffB0.7310.9693.421threading_9-HVTLVEINVKEDKVDQFIEVFRANHLGSIREAGNLRFDVLRDEHIPTRFYIYEAYTDEAAVAIHKTTPHYLQCVEQLAP-LTGPRKKTVFIGL-P
10SPARKS1y0ha0.1680.9903.299threading_10PVAVIARFMPRPDARSALRALLDAMITPTRAEDGCRSYDLYES-ADGGELVLFERYRSRIALDEHRGSPHYLNYRAQVGELLTRPVAVTVLAPLDE

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.904 to 2omoA
SCOP code=d.58.4.11
TM-score=0.402 to 1o3uA
SCOP code=a.24.16.3
TM-score=0.904 to 2omoA
SCOP code=d.58.4.11
TM-score=0.903 to 2omoA
SCOP code=d.58.4.11
TM-score=0.904 to 2omoA
SCOP code=d.58.4.11