Template-based Modeling Results for HSLR_ECOLI

Submitted Primary Sequence

>Length 133
MKEKPAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSKPSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMALARKLNALTMPHPDRRPDKKERRDLLRFKHGDSE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKEKPAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSKPSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMALARKLNALTMPHPDRRPDKKERRDLLRFKHGDSE
CCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHCCCEEECCEECCCCCCCCCCCEEEEEECCEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKEKPAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSKPSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMALARKLNALTMPHPDRRPDKKERRDLLRFKHGDSE
5544322200001001001012011002200421101021221312320322010101112222101010023343202101301331232233232111023122221232432133321220231353434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKEKPAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSKPSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMALARKLNALTMPHPDRRPDKKERRDLLRFKHGDSE
1	MUSTER	1dm9B	1.000	0.805	3.840	threading_1	---KPAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSKPSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMALARKLNALTMP-----------------------
2	SPARKS	1dm9a	1.000	0.782	4.043	threading_2	----PAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSKPSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMALARKLNALT-------------------------
3	PROSPECT2	1dm9a	0.913	0.782	1.842	threading_3	----PAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSKPSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAALLYEETAESVEKREK--------------------MALARKLNA-----LT
4	PPA-I	1dm9B	1.000	0.805	7.254	threading_4	---KPAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSKPSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMALARKLNALTMP-----------------------
5	HHPRED-l	1dm9_A	1.000	0.782	6.070	threading_5	----PAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSKPSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMALARKLNALT-------------------------
6	HHPRED-g	1dm9_A	1.000	0.782	6.827	threading_6	----PAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSKPSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMALARKLNALT-------------------------
7	SP3	1dm9a	1.000	0.782	3.762	threading_7	----PAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSKPSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMALARKLNALT-------------------------
8	SAM-T99	1dm9B	1.000	0.805	5.223	threading_8	---KPAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSKPSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMALARKLNALTMP-----------------------
9	MUSTER	2k6pA	0.262	0.632	2.722	threading_9	--------MRIDKFLQSVGLVKRRVLATDMCNVGAVWLNGSCAKASKEVKAGDTISLHYLKGIEEYTILQIPALKNVPRKDTHLYIAPKTKE-----------------------------------------
10	SPARKS	2k6pa	0.262	0.632	2.849	threading_10	--------MRIDKFLQSVGLVKRRVLATDMCNVGAVWLNGSCAKASKEVKAGDTISLHYLKGIEEYTILQIPALKNVPRKDTHLYIAPKTKE-----------------------------------------

Predicted Tertiary Structure


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TM-score=0.839 to 1dm9B TM-score=0.926 to native SCOP code=d.66.1.3	TM-score=0.839 to 1dm9B TM-score=0.926 to native SCOP code=d.66.1.3	TM-score=0.831 to 1dm9B TM-score=0.917 to native SCOP code=d.66.1.3	TM-score=0.791 to 1dm9B TM-score=0.872 to native SCOP code=d.66.1.3	TM-score=0.839 to 1dm9B TM-score=0.926 to native SCOP code=d.66.1.3

Experimental Structure

Download 1dm9B

SCOP code=d.66.1.3