Template-based Modeling Results for HOLD_ECOLI

Submitted Primary Sequence

>Length 137
MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSHCNSWRLGTDEPLSLEGAQVASPALTDLRANPTARAALWQQICTYEHDFFPRND
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSHCNSWRLGTDEPLSLEGAQVASPALTDLRANPTARAALWQQICTYEHDFFPRND
CCCHHHHHHHHCCCCEEEEECHHHCCCCCCCCCCHHCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEECCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSHCNSWRLGTDEPLSLEGAQVASPALTDLRANPTARAALWQQICTYEHDFFPRND
55231110132130110101112103231212022301000003311222220002004102022310110122102202320300001011332121310100011022031232012300210031241123445
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSHCNSWRLGTDEPLSLEGAQVASPALTDLRANPTARAALWQQICTYEHDFFPRND
1	MUSTER	1em8D	1.000	0.818	3.737	threading_1	-------------------------QGEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSHCNSWRLGTDEPLSLEGAQVASPALTDLRANPTARAALWQQICTYEHDFFPRND
2	SPARKS	1em8b	1.000	0.803	4.231	threading_2	--------------------------GEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSHCNSWRLGTDEPLSLEGAQVASPALTDLRANPTARAALWQQICTYEHDFFPRN-
3	PROSPECT2	1em8B	1.000	0.803	2.264	threading_3	--------------------------GEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSHCNSWRLGTDEPLSLEGAQVASPALTDLRANPTARAALWQQICTYEHDFFPRN-
4	PPA-I	1em8D	1.000	0.818	10.209	threading_4	-------------------------QGEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSHCNSWRLGTDEPLSLEGAQVASPALTDLRANPTARAALWQQICTYEHDFFPRND
5	HHPRED-l	3sxu_B	1.000	0.745	10.718	threading_5	--------------------------------IPAHVRLVMVANDLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSHCNSWRLGTDEPLSLEGAQVASPALTDLRANPTARAALWQQICTYEHDFFP---
6	HHPRED-g	3sxu_B	1.000	0.745	9.360	threading_6	--------------------------------IPAHVRLVMVANDLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSHCNSWRLGTDEPLSLEGAQVASPALTDLRANPTARAALWQQICTYEHDFFP---
7	SP3	1em8b	1.000	0.803	4.002	threading_7	--------------------------GEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSHCNSWRLGTDEPLSLEGAQVASPALTDLRANPTARAALWQQICTYEHDFFPRN-
8	SAM-T99	1em8D	1.000	0.818	5.447	threading_8	-------------------------QGEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSHCNSWRLGTDEPLSLEGAQVASPALTDLRANPTARAALWQQICTYEHDFFPRND
9	MUSTER	1l9gA	0.153	0.956	0.719	threading_9	MYT-REELMEIVRVKK---TACPLHLNRTNVVVNLDTRIVFVGEGPGEEEDMLLTELLRESGIRREDVYICTPEEQAAIEIINPDVIVALGKKVSWLGGKKVIPTFHPSYLLRNNELRRIVLEDIEKAKSFI--KKE
10	SPARKS	1whza	0.172	0.467	0.680	threading_10	PREEVARKLRRLGFVERA-------KGGHRLYTHPDGRIVVVPFHSGELPKGTFKRILRDAGLTEEEFHNL------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.904 to 1em8D TM-score=0.995 to native SCOP code=c.126.1.1	TM-score=0.904 to 1em8D TM-score=0.995 to native SCOP code=c.126.1.1	TM-score=0.873 to 1em8D TM-score=0.958 to native SCOP code=c.126.1.1	TM-score=0.873 to 1em8D TM-score=0.958 to native SCOP code=c.126.1.1	TM-score=0.904 to 1em8D TM-score=0.995 to native SCOP code=c.126.1.1

Experimental Structure

Download 1em8D

SCOP code=c.126.1.1