Template-based Modeling Results for HOKD_ECOLI

Submitted Primary Sequence

>Length 51
MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE
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--------10--------20--------30--------40--------50

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE
CCHHHHHEEEEEEEEEEEEEEEEEECCEEEEEEEECCCEEEEEEEEECCCC
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--------10--------20--------30--------40--------50

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE
554332111000000000001000233100102022232200001123366
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--------10--------20--------30--------40--------50

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE
1	SPARKS	1guta	0.157	1.000	1.143	threading_1	VGLKKGVVTAEVVLEIANKITSIISLDSVEELGVKEGAELTAVVKSTDVMI
2	SPARKS	2qtxa	0.216	1.000	1.141	threading_2	FEYARRLNGKKVKIFLREVLDAEVTGVSNYEIMVKVGDRNLLVFKAIDYIE
3	SPARKS	1fr3a	0.255	1.000	1.140	threading_3	MKIVKGTVMAKIVMDYKTELVAAITIDSVADLDLVPGDKVTALVKATEMEV
4	MUSTER	1wduB	0.294	1.000	0.783	threading_4	TAQGDGTVKAAIAVDLDVIQYPQLTTNNIVVVGIRTRAWEITLVSYYEPDK
5	SPARKS	1h9ra2	0.163	0.961	0.992	threading_5	ISHERGAEQCEVLMALPQTLCATVPVNEA--TSLQQGQNVTAYFNADSVII
6	PROSPECT2	2yvmA1	0.200	0.784	0.531	threading_6	MSPWER----------ILLEEILSEPVRLVKERVRTHTGRELTYV-YRPGP
7	PPA-I	2p25A1	0.130	0.902	0.799	threading_7	FKE----IHHVAINAFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFP-
8	HHPRED-l	2hz5_A	0.261	0.902	0.609	threading_8	MDTQYASLMHSFILKARSTVRDIDPQNDLTFLRIRSKKNEIMVAP---Y--
9	HHPRED-g	2hz5_A	0.239	0.902	0.553	threading_9	MDNPTASLMHSFILKARSTVRDIDPQNDLTFLRIRSKKNEIMVAP-----Y
10	SP3	2qtxa	0.216	1.000	0.802	threading_10	FEYARRLNGKKVKIFLREVLDAEVTGVSNYEIMVKVGDRNLLVFKAIDYIE

Predicted Tertiary Structure


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TM-score=0.344 to 1vfgB SCOP code=a.173.1.1	TM-score=0.738 to 1gugA SCOP code=b.40.6.1	TM-score=0.706 to 1kq1H SCOP code=b.38.1.2	TM-score=0.646 to 1fr3L SCOP code=b.40.6.1	TM-score=0.535 to 1wduB SCOP code=d.151.1.1