Template-based Modeling Results for HNS_ECOLI

Submitted Primary Sequence

>Length 137
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQYREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDENGETKTWTGQGRTPAVIKKAMDEQGKSLDDFLIKQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQYREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDENGETKTWTGQGRTPAVIKKAMDEQGKSLDDFLIKQ
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQYREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDENGETKTWTGQGRTPAVIKKAMDEQGKSLDDFLIKQ
42201211210110211144021310230131032003223433222123233223203201300332101032003121323332423323221312222430221000021311110230023213213211143
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQYREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDENGETKTWTGQGRTPAVIKKAMDEQGKSLDDFLIKQ
1	MUSTER	1lr1A	0.982	0.416	1.171	threading_1	-SEALKILNNIRTLRAQARESTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKL-------------------------------------------------------------------------------
2	SPARKS	1lr1a	0.982	0.416	1.258	threading_2	-SEALKILNNIRTLRAQARESTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKL-------------------------------------------------------------------------------
3	HHPRED-l	3nr7_A	0.963	0.591	4.500	threading_3	-SEALKILNNIRTLRAQARESTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQYREMLIADGIDPNELLNSMAAA-------------------------------------------------------
4	PPA-I	1hnrA	1.000	0.343	2.452	threading_4	------------------------------------------------------------------------------------------AQRPAKYSYVDENGETKTWTGQGRTPAVIKKAMDEQGKSLDDFLIKQ
5	HHPRED-g	3nr7_A	0.963	0.591	4.172	threading_5	-SEALKILNNIRTLRAQARESTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQYREMLIADGIDPNELLNSMAAA-------------------------------------------------------
6	SAM-T99	1hnsA	1.000	0.343	2.527	threading_6	------------------------------------------------------------------------------------------AQRPAKYSYVDENGETKTWTGQGRTPAVIKKAMDEQGKSLDDFLIKQ
7	MUSTER	1hnrA	1.000	0.343	1.169	threading_7	------------------------------------------------------------------------------------------AQRPAKYSYVDENGETKTWTGQGRTPAVIKKAMDEQGKSLDDFLIKQ
8	PPA-I	1lr1A	0.982	0.416	2.442	threading_8	-SEALKILNNIRTLRAQARESTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKL-------------------------------------------------------------------------------
9	PPA-I	1ov9B	0.562	0.350	1.719	threading_9	--EITKTLLNIRSLRAYARELTIEQLEEALDKLTTVVQERKEAEAEEIAA---------------------------------------------------------------------------------------
10	SPARKS	1hns_	1.000	0.343	1.002	threading_10	------------------------------------------------------------------------------------------AQRPAKYSYVDENGETKTWTGQGRTPAVIKKAMDEQGKSLDDFLIKQ

Predicted Tertiary Structure


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TM-score=0.494 to 1lr1A SCOP code=a.155.1.1	TM-score=0.642 to 1hnrA SCOP code=a.155.1.1	TM-score=0.577 to 1lr1A SCOP code=a.155.1.1	TM-score=0.513 to 1fe6A SCOP code=h.1.19.1	TM-score=0.642 to 1hnrA SCOP code=a.155.1.1