Template-based Modeling Results for HICA_ECOLI

Submitted Primary Sequence

>Length 58
MKQSEFRRWLESQGVDVANGSNHLKLRFHGRRSVMPRHPCDEIKEPLRKAILKQLGLS
1234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKQSEFRRWLESQGVDVANGSNHLKLRFHGRRSVMPRHPCDEIKEPLRKAILKQLGLS
CCHHHHHHHHHHCCEEEECCCCEEEEEECCEEEECCCCCCCCCCHHHHHHHHHHCCCC
1234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKQSEFRRWLESQGVDVANGSNHLKLRFHGRRSVMPRHPCDEIKEPLRKAILKQLGLS
5512202311231102023222101010212200014121330332013201331324
1234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKQSEFRRWLESQGVDVANGSNHLKLRFHGRRSVMPRHPCDEIKEPLRKAILKQLGLS
1	MUSTER	1whzA	0.281	0.983	3.001	threading_1	PRPEEVARKLRRLGFVERAKGGHRLYTHDGRIVVVPFH-SGELPKGTFKRILRDAGLT
2	SPARKS	1whza	0.281	0.983	1.584	threading_2	PRPEEVARKLRRLGFVERAKGGHRLYTHDGRIVVVPFH-SGELPKGTFKRILRDAGLT
3	PROSPECT2	1whzA	0.224	1.000	0.783	threading_3	PRPEEVARKLRRLGFVERAKGGHRLYTHPDGRIVVVPFHSGELPKGTFKRILRDAGLT
4	PPA-I	1whzA	0.224	1.000	3.662	threading_4	PRPEEVARKLRRLGFVERAKGGHRLYTHPDGRIVVVPFHSGELPKGTFKRILRDAGLT
5	HHPRED-l	1whz_A	0.291	0.948	4.583	threading_5	PRPEEVARKLRRLGFVR-AKGGHRLYTHPGRIVVVPFHS-GELPKGTFKRILRDAGL-
6	HHPRED-g	1whz_A	0.286	0.966	2.908	threading_6	PRPEEVARKLRRLGFVR-AKGGHRLYTHPGRIVVVPFH-SGELPKGTFKRILRDAGLT
7	SP3	1whza	0.281	0.983	1.474	threading_7	PRPEEVARKLRRLGFVERAKGGHRLYTHDGRIVVVPFH-SGELPKGTFKRILRDAGLT
8	SAM-T99	1whzA	0.281	0.983	1.867	threading_8	PRPEEVARKLRRLGFVERAKGGHRLYHPDGRIVVVPFHSG-ELPKGTFKRILRDAGLT
9	MUSTER	1dq3A3	0.138	1.000	1.011	threading_9	LNFNAFKEWASEYGVEFKTNGSQTIAIINDERISLGQHTRNRVSKAVLVKMLRKLEAT
10	SPARKS	3pcob	0.155	1.000	0.715	threading_10	IADEQVTDILRRLGCEVTEGKDEWQAVPVQASLIMGTHREADLSLKRVKTLLNDKGYQ

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.873 to 1whzA SCOP code=d.50.3.2	TM-score=0.908 to 1whzA SCOP code=d.50.3.2	TM-score=0.873 to 1whzA SCOP code=d.50.3.2	TM-score=0.908 to 1whzA SCOP code=d.50.3.2	TM-score=0.908 to 1whzA SCOP code=d.50.3.2