Template-based Modeling Results for HDEA_ECOLI


  Submitted Primary Sequence

>Length 110
MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKKDM
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKKDM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHCCCCCCCCEECCHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKKDM
53311011100000010002002122123443312100021022033212110000020033333333110113002301220030023232230232032213313533
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKKDM
1MUSTER1dj8A1.0000.7182.367threading_1-----------------------------NKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKK--
2SPARKS1dj8a1.0000.7182.474threading_2-----------------------------NKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKK--
3PROSPECT21dj8a1.0000.7181.181threading_3-----------------------------NKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKK--
4PPA-I1dj8A1.0000.7182.627threading_4-----------------------------NKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKK--
5HHPRED-l1dj8_A1.0000.7189.257threading_5-----------------------------NKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKK--
6HHPRED-g1dj8_A1.0000.7187.633threading_6-----------------------------NKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKK--
7SP31dj8a1.0000.7181.622threading_7-----------------------------NKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKK--
8SAM-T991dj8A1.0000.7186.040threading_8-----------------------------NKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKK--
9MUSTER2hz8A0.1140.9550.793threading_9MDELRELLKAEQQAIKIYKEVLKKAKEG-DEQELARL-IQEIVKAEKQ---AVKVYKEAAEKARNPEKQVIDLEDEEKHIEWLKAASKQGNAEQFASLVQQILQDEQRHV
10SPARKS1v85a0.1430.7640.647threading_10-----------------GSSGSSGEHGLLVHKAVDKWTTEEVVLWLEQLGPWASLYRDRFLSER------VNGRLLLTLT---EEEFSRAPNSSHRRVILTELERVRSGP

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.855 to 1dj8A
TM-score=0.994 to native
SCOP code=a.57.1.1
TM-score=0.855 to 1dj8A
TM-score=0.994 to native
SCOP code=a.57.1.1
TM-score=0.855 to 1dj8A
TM-score=0.994 to native
SCOP code=a.57.1.1
TM-score=0.855 to 1dj8A
TM-score=0.994 to native
SCOP code=a.57.1.1
TM-score=0.855 to 1dj8A
TM-score=0.994 to native
SCOP code=a.57.1.1

  Experimental Structure

Download 1dj8A
SCOP code=a.57.1.1