Template-based Modeling Results for GSPI_ECOLI


  Submitted Primary Sequence

>Length 125
MNKQSGMTLLEVLLAMSIFTAVALTLMSSMQGQRNAIERMRNETLALWIADNQLQSQDSFGEENTSSSGKELINGEEWNWRSDIHSSKDGTLLERTITVTLPSGQTTSLTRYQSIDNKSGQAQDD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNKQSGMTLLEVLLAMSIFTAVALTLMSSMQGQRNAIERMRNETLALWIADNQLQSQDSFGEENTSSSGKELINGEEWNWRSDIHSSKDGTLLERTITVTLPSGQTTSLTRYQSIDNKSGQAQDD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MNKQSGMTLLEVLLAMSIFTAVALTLMSSMQGQRNAIERMRNETLALWIADNQLQSQDSFGEENTSSSGKELINGEEWNWRSDIHSSKDGTLLERTITVTLPSGQTTSLTRYQSIDNKSGQAQDD
55433212110000000000000000010031122102201101001100100011121123333233122111112000102022152320010101001233332200200001232332459
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMNKQSGMTLLEVLLAMSIFTAVALTLMSSMQGQRNAIERMRNETLALWIADNQLQSQDSFGEENTSSSGKELINGEEWNWRSDIHSSKDGTLLERTITVTLPSGQTTSLTRYQSIDNKSGQAQDD
1MUSTER3ci0I0.1980.6482.174threading_1------------------------------------QHVLEEKTVAGWVAENQTALLYLTRGQRAVRQQGESDAGSRWYWRTTPLSTGNA-LQAVDIEVSLHEDFSSVIQSRRAWFSA-------
2SPARKS3ci0i0.1850.6482.248threading_2------------------------------------QHVLEEKTVAGWVAENQTALLYLTRGQRAVRQQGESDAGSRWYWRTTPLSTGNAL-QAVDIEVSLHEDFSSVIQSRRAWFSA-------
3PROSPECT23ci0I0.1980.6481.432threading_3Q------------------------------------HVLEEKTVAGWVAENQTALLYLTRGQRAVRQQGESDAGSRWYWRTTPLSTGNA-LQAVDIEVSLHEDFSSVIQSRRAWF-------SA
4PPA-I3ci0I0.1980.6483.249threading_4------------------------------------QHVLEEKTVAGWVAENQTALLYLTRGQRAVRQQGESDAGSRWYWRTTPLSTGNA-LQAVDIEVSLHEDFSSVIQSRRAWFSA-------
5HHPRED-l2ret_A0.1820.6165.474threading_5-----------------------------------TVGYLEQK-FAA-VADNQ-----LNPKNLKASNGEEELAGQTWYWKVAPVATTQPLLKAFDVSVAATTQ-ASPIITVRSYVASEN-----
6HHPRED-g2ret_A0.1820.6165.894threading_6-----------------------------------TVGYLEQK-FAA-VADNQ-----LNPKNLKASNGEEELAGQTWYWKVAPVATTQPLLKAFDVSVAATTQ-ASPIITVRSYVASEN-----
7SP33ci0i0.1980.6481.929threading_7------------------------------------QHVLEEKTVAGWVAENQTALLYLTRGQRAVRQQGESDAGSRWYWRTTPLSTGNA-LQAVDIEVSLHEDFSSVIQSRRAWFSA-------
8SAM-T993ci0I0.1980.6482.008threading_8------------------------------------QHVLEEKTVAGWVAENQTALLYLTRGQRAVRQQGESDAGSRWYWRTTPLSTGNA-LQAVDIEVSLHEDFSSVIQSRRAWFSA-------
9MUSTER2retA0.1900.6321.781threading_9-----------------------------------TVGYLEQKFAA--VADNQAV---LNPKNLKASNGEEELAGQTWYWKVAPVATTQPLLKAFDVSVAATTQAS-PIITVRSYV-----ASEN
10SPARKS3cfia0.1710.6082.217threading_10--------------------------------------YLEQKMFAAMVADNQMAMVMLN-KNLKASNGEEELAGQTWYWKVAPVATTQPL-KAFDVSVAAEKQAS-PIITVRSYVA--------

  Predicted Tertiary Structure

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TM-score=0.794 to 3ci0I
SCOP code=d.24.1.7
TM-score=0.365 to 1qorA
SCOP code=b.35.1.2
TM-score=0.780 to 3ci0I
SCOP code=d.24.1.7
TM-score=0.787 to 3ci0I
SCOP code=d.24.1.7
TM-score=0.794 to 3ci0I
SCOP code=d.24.1.7