Template-based Modeling Results for GRCA_ECOLI


  Submitted Primary Sequence

>Length 127
MITGIQITKAANDDLLNSFWLLDSEKGEARCIVAKAGYAEDEVVAVSKLGDIEYREVPVEVKPEVRVEGGQHLNVNVLRRETLEDAVKHPEKYPQLTIRVSGYAVRFNSLTPEQQRDVIARTFTESL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MITGIQITKAANDDLLNSFWLLDSEKGEARCIVAKAGYAEDEVVAVSKLGDIEYREVPVEVKPEVRVEGGQHLNVNVLRRETLEDAVKHPEKYPQLTIRVSGYAVRFNSLTPEQQRDVIARTFTESL
CCCEEECCCCCCHHHHHCEEECCHHHCCEEEEEECCCEECCEEECHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCHHHCCCEEEEEEEEEEEHHHCCHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MITGIQITKAANDDLLNSFWLLDSEKGEARCIVAKAGYAEDEVVAVSKLGDIEYREVPVEVKPEVRVEGGQHLNVNVLRRETLEDAVKHPEKYPQLTIRVSGYAVRFNSLTPEQQRDVIARTFTESL
5220021131112101200010223302110000222112111002230232322200020021022220100000003231022023203313300000000001012013300320022123334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMITGIQITKAANDDLLNSFWLLDSEKGEARCIVAKAGYAEDEVVAVSKLGDIEYREVPVEVKPEVRVEGGQHLNVNVLRRETLEDAVKHPEKYPQLTIRVSGYAVRFNSLTPEQQRDVIARTFTESL
1MUSTER2y8nA0.2120.9292.882threading_1TYSSVSAAAGTDYAIFESATVYDHSM--------HQNAQMNLKLHPTAVKGINGTRKLLDLVRAYMRKGGFHVQFNVVDSKTLRDAQLTPEKYRELMVRVAGFTQYWCEIGKPIQDEVIYRTEYDK-
2SPARKS2y8na0.2120.9294.362threading_2SDGSVSAAAGTIYAIFESATVYDHSMH--------QNAQMNLKLHPTAVKGINGTRKLLDLVRAYMRKGGFHVQFNVVDSKTLRDAQLTPEKYRELMVRVAGFTQYWCEIGKPIQDEVIYRTEYDK-
3PROSPECT21in0A0.1320.9530.676threading_3PSFDI-VSEITLHEVRNAVENADFRGVEAVIELNEKNETIKITTE-----SDFQLEQLIEILIGSCIKRGYSKEIKLIETEMAKKITKLKDSKIKVQTQIQGEQVRVTGKSRDDLQAVIQLVKSAEL
4PPA-I2jvfA0.1280.6771.090threading_4-----------------------HMKVDITIKIQRDGQEIEIDIR--VSTGKELERALQELEKALARAGARNVQITISALLELIARLLQKLGYKDINVRVNGTEVKIEVRV----------------
5HHPRED-l1h16_A0.4790.9376.394threading_5FGPGANRDQKGAVASLTSVAKLPFA-------YAKDGISYTFSIVPNALGKDDEVRKLAGLMDGYFHEGGQHLNVNVMNREMLLDAMENPEKYPQLTIRVSGYAVRFNSLTKEQQQDVITRTFTQS-
6HHPRED-g1h16_A0.4750.9456.179threading_6FGPGANPMHGGAVASLTSVAKLPFA-------YAKDGISYTFSIVPNALGKDDEKTNLAGLMDGYFHEGGQHLNVNVMNREMLLDAMENPEKYPQLTIRVSGYAVRFNSLTKEQQQDVITRTFTQSM
7SP32y8na0.2200.9294.034threading_7FVTLVSAAAGTIYAIFESATVYDHSM--------HQNAQMNLKLHPTAVKGINGTRKLLDLVRAYMRKGGFHVQFNVVDSKTLRDAQLTPEKYRELMVRVAGFTQYWCEIGKPIQDEVIYRTEYDK-
8SAM-T993pflA0.4331.0006.217threading_8NTPDGRRAGAPFGPGANPMHGRDQKGAVASLTSVAKGISYTFSIVPNALGKDDEVRKLAGLMDGYFIEGGQHLNVNVMNREMLLDAMENPEKYPQLTIRVSGYAVRFNSLTKEQQQDVITRTFTQSM
9MUSTER1r8wA0.2860.9372.813threading_9LADGVSPSRGCDTAACNSVSKLDHF-------IASNGTLFNQKFHPSALKGDNGLMNLSSLIRSYFDQKGFHVQFNVIDKKILLAAQKNPEKYQDLIVRVAGYSAQFISLDKSIQNDIIARTEHVM-
10SPARKS1r8wa0.2860.9374.255threading_10LADGVSPSRGCDTAACNSVSKLDHFI-------ASNGTLFNQKFHPSALKGDNGLMNLSSLIRSYFDQKGFHVQFNVIDKKILLAAQKNPEKYQDLIVRVAGYSAQFISLDKSIQNDIIARTEHVM-

  Predicted Tertiary Structure

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TM-score=0.498 to 1r8wA
SCOP code=c.7.1.1
TM-score=0.534 to 1r8wA
SCOP code=c.7.1.1
TM-score=0.502 to 1r8wA
SCOP code=c.7.1.1
TM-score=0.480 to 2c5sA
SCOP code=c.26.2.6
TM-score=0.754 to 2jvfA
SCOP code=k.41.1.1