Template-based Modeling Results for GCSH_ECOLI

Submitted Primary Sequence

>Length 129
MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE
CCCCCCCCEECCCCEEEEECCCCEEEEEECHHHHHHCCCEEEEECCCCCCEEECCCEEEEEEECCEEEEEECCCCEEEEEEHHHHHHCHHHHCCCCCCCCEEEEEEECCHHHHHHCCCHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE
544122312004311002224311000000220032012000020242222021222001011121102020102010010021023103102211222000010101233103301212112221444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE
1	MUSTER	3a7lA	1.000	0.992	4.332	threading_1	-SNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE
2	SPARKS	3mxua	0.504	0.969	5.063	threading_2	GPGSMSKTYFTQDHEWLSVEGQ-VVTVGITDYAQEQLGDLVFIDLPQNGTKLSKGDAAAVVESVKAASDVYAPLDGEVVEINAALAESPELVNQKAETEGWLWKMTVQDETQLERLLDEAAYKELI---
3	PROSPECT2	3a7aB	1.000	0.984	3.161	threading_3	--NVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE
4	PPA-I	3a7lA	1.000	0.992	6.244	threading_4	-SNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE
5	HHPRED-l	1onl_A	0.552	0.969	4.934	threading_5	--DIPKDRFYTKTHEWALPEG-DTVLVGITDYAQDALGDVVYVELPEVGRVVEKGEAVAVVESVKTASDIYAPVAGEIVEVNLALEKTPELVNQDPYGEGWIFRLKPRDMGDLDELLDAGGYQEVLES-
6	HHPRED-g	1onl_A	0.563	0.977	4.370	threading_6	-D-IPKDRFYTKTHEWALPEGD-TVLVGITDYAQDALGDVVYVELPEVGRVVEKGEAVAVVESVKTASDIYAPVAGEIVEVNLALEKTPELVNQDPYGEGWIFRLKPRDMGDLDELLDAGGYQEVLESE
7	SP3	3mxua	0.512	0.969	5.060	threading_7	QTQGPSKTYFTQDHEWLSVEGQ-VVTVGITDYAQEQLGDLVFIDLPQNGTKLSKGDAAAVVESVKAASDVYAPLDGEVVEINAALAESPELVNQKAETEGWLWKMTVQDETQLERLLDEAAYKELI---
8	SAM-T99	3a7lA	1.000	0.992	4.785	threading_8	-SNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE
9	MUSTER	1onlA	0.563	0.977	4.035	threading_9	--DIPKDRFYTKTHEWALPEGD-TVLVGITDYAQDALGDVVYVELPEVGRVVEKGEAVAVVESVKTASDIYAPVAGEIVEVNLALEKTPELVNQDPYGEGWIFRLKPRDMGDLDELLDAGGYQEVLESE
10	SPARKS	3ifta	0.484	0.992	4.947	threading_10	VSDIPSDLHYTAEHEWIRRSGDDTVRVGITDYAQSALGDVVFVQLPVIGTAVTAGETFGEVESTKSVSDLYAPISGKVSEVNSDLDGTPQLVNSDPYGAGWLLDIQVDSESALTTLLDAEAYRGTLTE-

Predicted Tertiary Structure


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TM-score=0.956 to 1onlA TM-score=0.999 to native SCOP code=b.84.1.1	TM-score=0.956 to 1onlA TM-score=0.999 to native SCOP code=b.84.1.1	TM-score=0.833 to 1onlA TM-score=0.827 to native SCOP code=b.84.1.1	TM-score=0.941 to 1onlA TM-score=0.968 to native SCOP code=b.84.1.1	TM-score=0.956 to 1onlA TM-score=0.999 to native SCOP code=b.84.1.1

Experimental Structure

Download 3a7lA

SCOP code=b.84.1.1