Template-based Modeling Results for PTKB_ECOLI

Submitted Primary Sequence

>Length 94
MKRKIIVACGGAVATSTMAAEEIKELCQNHNIPVELIQCRVNEIETYMDGVHLICTTAKVDRSFGDIPLVHGMPFISGIGIEALQNKILTILQG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKRKIIVACGGAVATSTMAAEEIKELCQNHNIPVELIQCRVNEIETYMDGVHLICTTAKVDRSFGDIPLVHGMPFISGIGIEALQNKILTILQG
CCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKRKIIVACGGAVATSTMAAEEIKELCQNHNIPVELIQCRVNEIETYMDGVHLICTTAKVDRSFGDIPLVHGMPFISGIGIEALQNKILTILQG
5412000001100000110031022004424020201102032022203201000000202532330100100000111113101320132135
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKRKIIVACGGAVATSTMAAEEIKELCQNHNIPVELIQCRVNEIETYMDGVHLICTTAKVDRSFGDIPLVHGMPFISGIGIEALQNKILTILQG
1	MUSTER	1tvmA	0.947	1.000	2.596	threading_1	SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIETYMDGVHLICTTARVDRSFGDIPLVHGMPFVSGVGIEALQNKILTILQG
2	SPARKS	1tvma	0.947	1.000	2.058	threading_2	SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIETYMDGVHLICTTARVDRSFGDIPLVHGMPFVSGVGIEALQNKILTILQG
3	PROSPECT2	1tvmA	0.957	1.000	1.459	threading_3	MKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIETYMDGVHLICTTARVDRSFGDIPLVHGMPFVSGVGIEALQNKILTILQG
4	PPA-I	1tvmA	0.947	1.000	3.735	threading_4	SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIETYMDGVHLICTTARVDRSFGDIPLVHGMPFVSGVGIEALQNKILTILQG
5	HHPRED-l	1tvm_A	0.946	0.989	4.195	threading_5	SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIETYMDGVHLICTTARVDRSFGDIPLVHGMPFVSGVGIEALQNKILTILQ-
6	HHPRED-g	1tvm_A	0.947	1.000	2.830	threading_6	SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIETYMDGVHLICTTARVDRSFGDIPLVHGMPFVSGVGIEALQNKILTILQG
7	SP3	1tvma	0.947	1.000	2.484	threading_7	SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIETYMDGVHLICTTARVDRSFGDIPLVHGMPFVSGVGIEALQNKILTILQG
8	SAM-T99	1tvmA	0.947	1.000	3.476	threading_8	SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIETYMDGVHLICTTARVDRSFGDIPLVHGMPFVSGVGIEALQNKILTILQG
9	MUSTER	3czcA	0.141	0.904	2.027	threading_9	-MVKVLTACGNG-GSSVIK--KVENALRQLGVDIESASCSVGEAKGLASNYDIVVASNHLIHELTNGKLIGLDNL----DDNEIKTKLEEALK-
10	SPARKS	3czca	0.125	0.936	1.361	threading_10	-MVKVLTACGNG-GSSVI--KKVENALRQLGVDIESASCSVGEAKGLASNYDIVVASNHLIHELDGRTNGKLIG-LDNLDDNEIKTKLEEALK-

Predicted Tertiary Structure


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TM-score=0.696 to 1vkrA SCOP code=c.44.2.1	TM-score=0.408 to 1ug8A SCOP code=d.68.7.1	TM-score=0.694 to 1vkrA SCOP code=c.44.2.1	TM-score=0.692 to 1vkrA SCOP code=c.44.2.1	TM-score=0.696 to 1vkrA SCOP code=c.44.2.1