Template-based Modeling Results for FRDD_ECOLI

Submitted Primary Sequence

>Length 119
MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGLFPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFYGLAAILTVVTLIGVVTI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGLFPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFYGLAAILTVVTLIGVVTI
CCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGLFPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFYGLAAILTVVTLIGVVTI
55332243233110000111101100100100111221212112121321113200100110001000000000000000010110011010101001000000000000000100022
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGLFPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFYGLAAILTVVTLIGVVTI
1	MUSTER	3cirD	1.000	1.000	5.259	threading_1	MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGLFPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFYGLAAILTVVTLIGVVTI
2	SPARKS	1kf6d	1.000	1.000	6.197	threading_2	MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGLFPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFYGLAAILTVVTLIGVVTI
3	PROSPECT2	1kf6d	1.000	1.000	1.919	threading_3	MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGLFPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFYGLAAILTVVTLIGVVTI
4	PPA-I	3cirD	1.000	1.000	8.131	threading_4	MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGLFPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFYGLAAILTVVTLIGVVTI
5	HHPRED-l	1kf6_D	1.000	0.992	11.353	threading_5	MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGLFPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFYGLAAILTVVTLIGVVT-
6	HHPRED-g	1kf6_D	1.000	1.000	9.974	threading_6	MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGLFPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFYGLAAILTVVTLIGVVTI
7	SP3	1kf6d	1.000	1.000	5.241	threading_7	MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGLFPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFYGLAAILTVVTLIGVVTI
8	SAM-T99	3cirD	1.000	1.000	8.103	threading_8	MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGLFPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFYGLAAILTVVTLIGVVTI
9	MUSTER	1nekC	0.224	0.899	1.156	threading_9	MINVKKQR---PV----FPI-TAIASILVSGVITFVAVGILLWLLGTSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDF--TFEAGKKISFVITVVLSLLAGVLVW--
10	SPARKS	1nekc	0.190	0.975	0.652	threading_10	MINVKKQRNDRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEG--FEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFG-YLEETFEAGKRSAKISFVITVVLSLLA

Predicted Tertiary Structure


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TM-score=0.925 to 3cirD TM-score=0.913 to native SCOP code=f.21.2.2	TM-score=0.925 to 3cirD TM-score=0.913 to native SCOP code=f.21.2.2	TM-score=0.914 to 3cirD TM-score=0.926 to native SCOP code=f.21.2.2	TM-score=0.914 to 3cirD TM-score=0.926 to native SCOP code=f.21.2.2	TM-score=0.925 to 3cirD TM-score=0.913 to native SCOP code=f.21.2.2

Experimental Structure

Download 1kf6D

SCOP code=f.21.2.2