Submitted Primary Sequence |
>Length 97 MSIDRTSPLKPVSTVQPRETTDAPVTNSRAAKTTASTSTSVTLSDAQAKLMQPGSSDINLERVEALKLAIRNGELKMDTGKIADALINEAQQDLQSN 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567 --------10--------20--------30--------40--------50--------60--------70--------80--------90 |
Predicted Secondary Structure |
>C-coil;H-helix;E-sheet MSIDRTSPLKPVSTVQPRETTDAPVTNSRAAKTTASTSTSVTLSDAQAKLMQPGSSDINLERVEALKLAIRNGELKMDTGKIADALINEAQQDLQSN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHCCC 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567 --------10--------20--------30--------40--------50--------60--------70--------80--------90 |
Predicted Solvent Accessibility |
>0-buried to 9-exposed MSIDRTSPLKPVSTVQPRETTDAPVTNSRAAKTTASTSTSVTLSDAQAKLMQPGSSDINLERVEALKLAIRNGELKMDTGKIADALINEAQQDLQSN 5423322223211212223223232232422322223222010130123123322231213102001200441202001020021002201312434 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567 --------10--------20--------30--------40--------50--------60--------70--------80--------90 |
Top 10 Templates |
Rank | Method | Template | Identity | Coverage | N-Zscore | Threading Alignment | MSIDRTSPLKPVSTVQPRETTDAPVTNSRAAKTTASTSTSVTLSDAQAKLMQPGSSDINLERVEALKLAIRNGELKMDTGKIADALINEAQQDLQSN |
1 | HHPRED-l | 1rp3_B | 0.224 | 0.784 | 2.324 | threading_1 | --VNRIE-LSRLIGLLLET------------SGTNKIEDKVTLSKIAQELSKNDVEEKDEKKVKELKEKIEKGEYEVSDEKVVKGLIEFFT------ |
2 | HHPRED-g | 1rp3_B | 0.211 | 0.784 | 2.117 | threading_2 | --VNRIELSRLIGLLLET-------------SGTNKIEDKVTLSKIAQELSKNDVEEKDEKKVKELKEKIEKGEYEVSDEKVVKGLIEFFT------ |
3 | SAM-T99 | 1rp3B | 0.250 | 0.701 | 1.195 | threading_3 | -----------------------LIGLLLETSGTNKIEDKVTLSKIAQELSKNDVEEKDLEKVKELKEKIEKGEYEVSDEKVVKGLIEFFT------ |
4 | MUSTER | 1rp3B | 0.211 | 0.784 | 0.959 | threading_4 | ---------------VNRIELSRLIGLLLETSGTNKIEDKVTLSKIAQELSKNDVEEKDEKKVKELKEKIEKGEYEVSDEKVVKGLIEFFT------ |
5 | SPARKS | 1rp3b | 0.211 | 0.784 | 0.722 | threading_5 | ---------------VNRIELSRLIGLLLETSGTNKIEDKVTLSKIAQELSKNDVEEKDEKKVKELKEKIEKGEYEVSDEKVVKGLIEFFT------ |
6 | PROSPECT2 | 2gqbA | 0.113 | 1.000 | 0.732 | threading_6 | MSIFGKGDSAAASPGGAQAPATTGAAGTAPTAPQPTAAPSIDVAPILDKAVKAKGEKLELSARKELAKELGYSGDMNDSASMNIWLHKQVMSKLVKH |
7 | PPA-I | 1rp3B | 0.211 | 0.784 | 0.939 | threading_7 | ---------------VNRIELSRLIGLLLETSGTNKIEDKVTLSKIAQELSKNDVEEKDEKKVKELKEKIEKGEYEVSDEKVVKGLIEFFT------ |
8 | HHPRED-l | 2hqb_A | 0.127 | 0.732 | 0.712 | threading_8 | YVGDQAD-LGGSTILVQHLAKRFQEGKLESNLYYDFQDGVVSLGEF-----SSVVPDEVREQIDAISTYIQTGQFPH-------------------- |
9 | HHPRED-g | 3dza_A | 0.172 | 0.598 | 0.547 | threading_9 | ---------------------------------APAAAATTQVQKEAADVLQVAVQGAN-RDIQFARLALFHGQP-----DSAKKLTDDAAALLAAD |
10 | SP3 | 3u8va | 0.183 | 0.845 | 0.529 | threading_10 | -------------SGHTAHVDEAVKHAEEAVAHGKEGHTDQLLEHAKESLTHAKAASTVGHGIKHLEDAIKHGE--EGHVGVATKHAQEAIEHLRAS |
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