Template-based Modeling Results for EMRE_ECOLI


  Submitted Primary Sequence

>Length 110
MNPYIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNPYIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MNPYIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH
32000000000001000000010031123100000000000000000010012020000000010001000000000002241201000000000000000211243344
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMNPYIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH
1MUSTER3b5dA1.0000.9093.000threading_1-----YLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS-----
2SPARKS1s7ba1.0000.9647.223threading_2----IYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH
3PROSPECT21s7bA0.9910.9641.504threading_3I----YLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH
4PPA-I3b61A1.0000.9732.904threading_4---YIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH
5HHPRED-l2i68_A1.0000.7098.312threading_5---YIYLGGAILAEVIGTTLM------------VGTIICYCASFWLLAQTLA-----IAYAIWSGVGIVLISLLSWGFFG------AIIGMMLICAGVLIINLL------
6HHPRED-g2i68_A1.0000.7098.059threading_6---YIYLGGAILAEVIGTTLM------------VGTIICYCASFWLLAQTLA-----IAYAIWSGVGIVLISLLSWGFFG------AIIGMMLICAGVLIINLL------
7SP31s7ba1.0000.9644.782threading_7----IYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH
8SAM-T993b61A1.0000.9736.009threading_8---YIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH
9MUSTER3b61A1.0000.9732.810threading_9---YIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH
10SPARKS1zk8a0.1560.9911.009threading_10LQDVRKNLGIYGIKKLHNRLEEAAEDKRDIHALGEAYVAFVRKHPGLYEATFLRDEEVRKAGDGIVKLCLQVLQQYGLEGENA-LHATRGFRSICHGFASIEQQGGFGLP

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.515 to 1xeqA
TM-score=0.333 to native
SCOP code=a.16.1.1
TM-score=0.330 to 1pm6A
TM-score=0.190 to native
SCOP code=a.6.1.7
TM-score=0.492 to 1n5uA
TM-score=0.391 to native
SCOP code=a.126.1.1
TM-score=0.485 to 1n5uA
TM-score=0.346 to native
SCOP code=a.126.1.1
TM-score=0.535 to 1fewA
TM-score=0.946 to native
SCOP code=a.7.4.1

  Experimental Structure

Download 3b61A
SCOP code=a.7.4.1