Template-based Modeling Results for CYOD_ECOLI


  Submitted Primary Sequence

>Length 109
MSHSTDHSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASPAVILGTILAMAVVQVLVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMMMH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSHSTDHSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASPAVILGTILAMAVVQVLVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMMMH
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSHSTDHSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASPAVILGTILAMAVVQVLVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMMMH
5432222222110102100100000000100000001111022010000000000000000010001121323322212110000111011000001111222221223
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSHSTDHSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASPAVILGTILAMAVVQVLVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMMMH
1PPA-I2l35A0.1900.5781.355threading_1------CSTVSPGVLAGIVVGDLVLTVLIALAVYFLGRLGTAEVLGIISIVLVATVLKTIVLIPFLEQN----------------------------------------
2PPA-I2ksfA0.1830.8531.011threading_2MVQIQG-----------SVVAAALSAVITLIAMQWLMAFDAANGVVVVALFYPSVVATVINVVSFDLFFIAPRGTLAVSLLTFAVMLTVGLVIGNLTAGVRYQA-----
3MUSTER2bg9C20.1740.7890.855threading_3L-------------VINFITPCVLISFLAALAFYLPAESGEKMSTAICVLLAQAVFLLLTSQRL----ETALAVPLIGKYLMFIMSLVTGVVVNCGIVL-NFH-----F
4SPARKS2l35a0.2060.5780.864threading_4-------------------------------------CSTVSPGVLAGIVVGDLVLTVLIALAVYFLGRLGTAE---VLGIISIVLVATVLKTIVLIPFLEQN------
5PROSPECT22iu5A0.0970.9450.659threading_5MEKSIINDNSDYYGWQNELLLLLRYLDENQIFYQKIFVIDKNFEHFFLIQWENLLDKVIFDQE------KKSDYHWSDLEKSFICRYNAAAICAITRESIIRGNSLIFE
6PPA-I3siaA20.0650.8440.912threading_6ARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFAMAFCDLNCWIAICAFAAQTRSAYQMIFMNPYYGPMKPFNPMEFGKFLDVVTSLLE-----------------
7HHPRED-l3rhw_A0.1380.8620.631threading_7VSWVSF--WFDRTAI-PARVTLGVTTLLTMTAQSAGINSQLPPVSCMTFIFCALLEFALVN--HIANAGTT---EWNDISLISRALFPVLFFVFNILYRFGH-------
8HHPRED-g2rh1_A0.1980.8810.775threading_8------------DEVWVVGMGIVMSLIVLAIVFTAIAKERL-QTVTNYFITSLACADLVMGLAVVFGAAHILMKMWTFGNFWFWTSIDVLCVTASIEITSPFKYQSLLT
9SP31k4cc0.1200.9170.613threading_9--------SALHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAITYPRALWWSVETATVGYGDL-YPVTLWGRCVAVVVMVAGITSFGLVTAALATWFVGREQERRGH
10SAM-T992e21A0.1910.8170.758threading_10--ALQNDEKIFSGERRVAFSGGVDSVVLTDVLLKLKNYFSL------------------VALAHFNHMLRESAERDEEFCKEFAKERNMKIFVGKEDVRAFAKENRMSL

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.543 to 1tuaA
SCOP code=d.51.1.1
TM-score=0.529 to 1tuaA
SCOP code=d.51.1.1
TM-score=0.595 to 2j0oA
SCOP code=a.250.1.1
TM-score=0.641 to 1sumB
SCOP code=a.7.12.1
TM-score=0.294 to 1r6vA
SCOP code=c.41.1.1