Template-based Modeling Results for CYAY_ECOLI

Submitted Primary Sequence

>Length 106
MNDSEFHRLADQLWLTIEERLDDWDGDSDIDCEINGGVLTITFENGSKIIINRQEPLHQVWLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGETVSFR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNDSEFHRLADQLWLTIEERLDDWDGDSDIDCEINGGVLTITFENGSKIIINRQEPLHQVWLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGETVSFR
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCEEEEECCCCHHHHHEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNDSEFHRLADQLWLTIEERLDDWDGDSDIDCEINGGVLTITFENGSKIIINRQEPLHQVWLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGETVSFR
5423202210230031023102313332201010120001020332110001223111100000331122011321100013223201300121013213221224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNDSEFHRLADQLWLTIEERLDDWDGDSDIDCEINGGVLTITFENGSKIIINRQEPLHQVWLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGETVSFR
1	MUSTER	2p1xA	1.000	1.000	4.739	threading_1	MNDSEFHRLADQLWLTIEERLDDWDGDSDIDCEINGGVLTITFENGSKIIINRQEPLHQVWLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGETVSFR
2	SPARKS	1ew4a	1.000	1.000	4.608	threading_2	MNDSEFHRLADQLWLTIEERLDDWDGDSDIDCEINGGVLTITFENGSKIIINRQEPLHQVWLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGETVSFR
3	PROSPECT2	1ew4a	1.000	1.000	2.308	threading_3	MNDSEFHRLADQLWLTIEERLDDWDGDSDIDCEINGGVLTITFENGSKIIINRQEPLHQVWLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGETVSFR
4	PPA-I	2p1xA	1.000	1.000	7.752	threading_4	MNDSEFHRLADQLWLTIEERLDDWDGDSDIDCEINGGVLTITFENGSKIIINRQEPLHQVWLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGETVSFR
5	HHPRED-l	1ew4_A	1.000	0.991	6.957	threading_5	MNDSEFHRLADQLWLTIEERLDDWDGDSDIDCEINGGVLTITFENGSKIIINRQEPLHQVWLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGETVSF-
6	HHPRED-g	1ew4_A	1.000	1.000	5.574	threading_6	MNDSEFHRLADQLWLTIEERLDDWDGDSDIDCEINGGVLTITFENGSKIIINRQEPLHQVWLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGETVSFR
7	SP3	1ew4a	1.000	1.000	4.296	threading_7	MNDSEFHRLADQLWLTIEERLDDWDGDSDIDCEINGGVLTITFENGSKIIINRQEPLHQVWLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGETVSFR
8	SAM-T99	2p1xA	1.000	1.000	5.397	threading_8	MNDSEFHRLADQLWLTIEERLDDWDGDSDIDCEINGGVLTITFENGSKIIINRQEPLHQVWLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGETVSFR
9	MUSTER	1ly7A	0.255	1.000	3.526	threading_9	MDETTYERLAEETLDSLAEFFEDLADKEDYDVSFGSGVLTVKLGDLGTYVINKQTPNKQIWLSSPSSGPKYDWTGKNWVYSHDGVSLHELLAAELTKALKTKLDLS
10	SPARKS	1ekga	0.245	1.000	4.057	threading_10	LDETTYERLAEETLDSLAEFFEDLYTFEDYDVSFGSGVLTVKLGDLGTYVINKQTPNKQIWLSSPSSGPKYDWTGKNWVYSHDGVSLHELLAAELTKALKTKLDLS

Predicted Tertiary Structure


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TM-score=0.998 to 2p1xA TM-score=0.971 to native SCOP code=d.82.2.1	TM-score=0.998 to 2p1xA TM-score=0.971 to native SCOP code=d.82.2.1	TM-score=0.973 to 2p1xA TM-score=0.999 to native SCOP code=d.82.2.1	TM-score=0.973 to 2p1xA TM-score=0.999 to native SCOP code=d.82.2.1	TM-score=0.998 to 2p1xA TM-score=0.971 to native SCOP code=d.82.2.1

Experimental Structure

Download 1ew4A

SCOP code=d.82.2.1