Template-based Modeling Results for CSPA_ECOLI

Submitted Primary Sequence

>Length 70
MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKGPAAGNVTSL
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--------10--------20--------30--------40--------50--------60--------70

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKGPAAGNVTSL
CCCCCCCEEEEEECCCCCEEECCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEC
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--------10--------20--------30--------40--------50--------60--------70

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKGPAAGNVTSL
5423120201001233000000133224000000000243213114322202010222241322221222
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--------10--------20--------30--------40--------50--------60--------70

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKGPAAGNVTSL
1	MUSTER	3i2zA	0.686	1.000	4.822	threading_1	HMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANVTAL
2	SPARKS	3trza	0.435	0.986	4.092	threading_2	LL-HGAGICKWFNVRMGFGFLSMTDPPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSAKGLESIRVTGP
3	PROSPECT2	3i2zA	0.686	1.000	1.627	threading_3	HMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANVTAL
4	PPA-I	3i2zA	0.686	1.000	7.285	threading_4	HMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANVTAL
5	HHPRED-l	1h95_A	0.435	0.986	3.403	threading_5	IATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNLRSVGDGETVEFDVVEGEKGAEAANVTG-
6	HHPRED-g	1h95_A	0.429	1.000	3.073	threading_6	IATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNLRSVGDGETVEFDVVEGEKGAEAANVTGP
7	SP3	1c9oa	0.576	0.943	3.817	threading_7	---MQRGKVKWFNNEKGYGFIEVEGG-SDVFVHFTAIQGEGFKTLEEGQEVSFEIVQGNRGPQAANVVKL
8	SAM-T99	1mjcA	1.000	0.986	4.263	threading_8	-SGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKGPAAGNVTSL
9	MUSTER	1mjcA	1.000	0.986	4.801	threading_9	-SGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKGPAAGNVTSL
10	SPARKS	1c9oa	0.576	0.943	4.035	threading_10	---MQRGKVKWFNNEKGYGFIEVEGG-SDVFVHFTAIQGEGFKTLEEGQEVSFEIVQGNRGPQAANVVKL

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.888 to 1mjcA TM-score=0.894 to native SCOP code=b.40.4.5	TM-score=0.888 to 1mjcA TM-score=0.894 to native SCOP code=b.40.4.5	TM-score=0.853 to 1mjcA TM-score=0.858 to native SCOP code=b.40.4.5	TM-score=0.888 to 1mjcA TM-score=0.894 to native SCOP code=b.40.4.5	TM-score=0.888 to 1mjcA TM-score=0.894 to native SCOP code=b.40.4.5

Experimental Structure

Download 1mjcA

SCOP code=b.40.4.5